Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxc8P09025 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxc8P09025 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxc8P09025 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxc8P09025 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxc8P09025 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Hoxc8P09025 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxc8P09025 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc8P09025 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc8P09025 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc8P09025 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc8P09025 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc8P09025 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc8P09025 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Hoxc8P09025 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc8P09025 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc8P09025 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc8P09025 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc8P09025 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc8P09025 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Hoxc8P09025 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc8P09025 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc8P09025 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc8P09025 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.89□□□□□ -0.03
Hoxc8P09025 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc8P09025 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc8P09025 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc8P09025 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc8P09025 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Hoxc8P09025 Gm38319-201ENSMUST00000194537 1266 ntBASIC14.89□□□□□ -0.03
Hoxc8P09025 Gm43818-201ENSMUST00000200605 466 ntBASIC14.89□□□□□ -0.03
Hoxc8P09025 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.89□□□□□ -0.03
Hoxc8P09025 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.89□□□□□ -0.03
Hoxc8P09025 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.89□□□□□ -0.03
Hoxc8P09025 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.89□□□□□ -0.03
Hoxc8P09025 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc8P09025 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc8P09025 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc8P09025 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc8P09025 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.89□□□□□ -0.03
Hoxc8P09025 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc8P09025 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc8P09025 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.89□□□□□ -0.03
Hoxc8P09025 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.88□□□□□ -0.03
Hoxc8P09025 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc8P09025 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc8P09025 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Hoxc8P09025 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Hoxc8P09025 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Hoxc8P09025 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc8P09025 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc8P09025 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc8P09025 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc8P09025 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc8P09025 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Hoxc8P09025 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc8P09025 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.88□□□□□ -0.03
Hoxc8P09025 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.88□□□□□ -0.03
Hoxc8P09025 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.88□□□□□ -0.03
Hoxc8P09025 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.88□□□□□ -0.03
Hoxc8P09025 Gm12403-201ENSMUST00000121384 959 ntBASIC14.88□□□□□ -0.03
Hoxc8P09025 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Hoxc8P09025 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc8P09025 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc8P09025 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc8P09025 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.88□□□□□ -0.03
Hoxc8P09025 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.88□□□□□ -0.03
Hoxc8P09025 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.88□□□□□ -0.03
Hoxc8P09025 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc8P09025 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.88□□□□□ -0.03
Hoxc8P09025 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Hoxc8P09025 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.88□□□□□ -0.03
Hoxc8P09025 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.88□□□□□ -0.03
Hoxc8P09025 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.88□□□□□ -0.03
Hoxc8P09025 Gm40466-201ENSMUST00000212174 422 ntBASIC14.88□□□□□ -0.03
Hoxc8P09025 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.88□□□□□ -0.03
Hoxc8P09025 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc8P09025 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc8P09025 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.88□□□□□ -0.03
Hoxc8P09025 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc8P09025 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.88□□□□□ -0.03
Hoxc8P09025 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.88□□□□□ -0.03
Hoxc8P09025 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc8P09025 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc8P09025 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc8P09025 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc8P09025 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc8P09025 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc8P09025 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc8P09025 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc8P09025 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.88□□□□□ -0.03
Hoxc8P09025 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc8P09025 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.87□□□□□ -0.03
Hoxc8P09025 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc8P09025 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc8P09025 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc8P09025 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc8P09025 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc8P09025 Gm29608-201ENSMUST00000190444 463 ntBASIC14.87□□□□□ -0.03
Hoxc8P09025 Gm38144-201ENSMUST00000192790 465 ntBASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms