Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ifna1P01572 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ifna1P01572 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.9□□□□□ -0.5
Ifna1P01572 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Ifna1P01572 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ifna1P01572 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ifna1P01572 Gm13233-201ENSMUST00000118760 1443 ntBASIC11.9□□□□□ -0.5
Ifna1P01572 Gm13244-201ENSMUST00000118855 1446 ntBASIC11.9□□□□□ -0.5
Ifna1P01572 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ifna1P01572 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ifna1P01572 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC11.9□□□□□ -0.5
Ifna1P01572 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC11.9□□□□□ -0.5
Ifna1P01572 Gm27300-201ENSMUST00000184085 97 ntBASIC11.9□□□□□ -0.5
Ifna1P01572 Gm27335-201ENSMUST00000184758 97 ntBASIC11.9□□□□□ -0.5
Ifna1P01572 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ifna1P01572 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC11.9□□□□□ -0.5
Ifna1P01572 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ifna1P01572 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC11.9□□□□□ -0.5
Ifna1P01572 Gm45747-201ENSMUST00000212203 999 ntBASIC11.9□□□□□ -0.5
Ifna1P01572 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ifna1P01572 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC11.9□□□□□ -0.5
Ifna1P01572 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC11.9□□□□□ -0.5
Ifna1P01572 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.9□□□□□ -0.5
Ifna1P01572 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Ifna1P01572 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ifna1P01572 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ifna1P01572 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ifna1P01572 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.9□□□□□ -0.5
Ifna1P01572 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ifna1P01572 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ifna1P01572 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ifna1P01572 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ifna1P01572 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ifna1P01572 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ifna1P01572 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC11.9□□□□□ -0.5
Ifna1P01572 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ifna1P01572 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ifna1P01572 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC11.9□□□□□ -0.5
Ifna1P01572 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.9□□□□□ -0.51
Ifna1P01572 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ifna1P01572 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ifna1P01572 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Ifna1P01572 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ifna1P01572 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Ifna1P01572 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ifna1P01572 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ifna1P01572 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Ifna1P01572 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC11.89□□□□□ -0.51
Ifna1P01572 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ifna1P01572 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ifna1P01572 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ifna1P01572 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.89□□□□□ -0.51
Ifna1P01572 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Ifna1P01572 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ifna1P01572 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ifna1P01572 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ifna1P01572 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ifna1P01572 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Ifna1P01572 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ifna1P01572 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.89□□□□□ -0.51
Ifna1P01572 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ifna1P01572 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ifna1P01572 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ifna1P01572 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC11.89□□□□□ -0.51
Ifna1P01572 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Ifna1P01572 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ifna1P01572 Gm13036-201ENSMUST00000117799 748 ntBASIC11.89□□□□□ -0.51
Ifna1P01572 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ifna1P01572 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC11.89□□□□□ -0.51
Ifna1P01572 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC11.89□□□□□ -0.51
Ifna1P01572 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC11.89□□□□□ -0.51
Ifna1P01572 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC11.89□□□□□ -0.51
Ifna1P01572 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC11.89□□□□□ -0.51
Ifna1P01572 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC11.89□□□□□ -0.51
Ifna1P01572 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ifna1P01572 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ifna1P01572 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ifna1P01572 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ifna1P01572 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Ifna1P01572 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ifna1P01572 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ifna1P01572 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.89□□□□□ -0.51
Ifna1P01572 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.89□□□□□ -0.51
Ifna1P01572 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ifna1P01572 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ifna1P01572 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Ifna1P01572 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ifna1P01572 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Ifna1P01572 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ifna1P01572 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ifna1P01572 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.88□□□□□ -0.51
Ifna1P01572 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ifna1P01572 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ifna1P01572 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ifna1P01572 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ifna1P01572 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ifna1P01572 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ifna1P01572 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.88□□□□□ -0.51
Ifna1P01572 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ifna1P01572 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms