Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
ClppO88696 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClppO88696 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClppO88696 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ClppO88696 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClppO88696 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.82□□□□□ -0.2
ClppO88696 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClppO88696 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ClppO88696 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.82□□□□□ -0.2
ClppO88696 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClppO88696 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClppO88696 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClppO88696 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClppO88696 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.82□□□□□ -0.2
ClppO88696 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClppO88696 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.82□□□□□ -0.2
ClppO88696 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClppO88696 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClppO88696 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
ClppO88696 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClppO88696 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
ClppO88696 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
ClppO88696 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
ClppO88696 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClppO88696 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClppO88696 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClppO88696 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ClppO88696 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClppO88696 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ClppO88696 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ClppO88696 Gm27838-201ENSMUST00000184829 128 ntBASIC13.81□□□□□ -0.2
ClppO88696 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ClppO88696 Gm5186-201ENSMUST00000218781 920 ntBASIC13.81□□□□□ -0.2
ClppO88696 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ClppO88696 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ClppO88696 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClppO88696 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClppO88696 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClppO88696 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
ClppO88696 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ClppO88696 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClppO88696 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
ClppO88696 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ClppO88696 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
ClppO88696 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClppO88696 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
ClppO88696 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClppO88696 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClppO88696 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClppO88696 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClppO88696 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClppO88696 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClppO88696 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
ClppO88696 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
ClppO88696 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClppO88696 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClppO88696 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClppO88696 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClppO88696 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.8□□□□□ -0.2
ClppO88696 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.8□□□□□ -0.2
ClppO88696 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ClppO88696 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.8□□□□□ -0.2
ClppO88696 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.8□□□□□ -0.2
ClppO88696 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClppO88696 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClppO88696 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClppO88696 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClppO88696 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClppO88696 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClppO88696 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ClppO88696 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ClppO88696 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
ClppO88696 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClppO88696 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClppO88696 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
ClppO88696 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.8□□□□□ -0.2
ClppO88696 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClppO88696 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClppO88696 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
ClppO88696 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClppO88696 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClppO88696 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.8□□□□□ -0.2
ClppO88696 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ClppO88696 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClppO88696 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClppO88696 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ClppO88696 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClppO88696 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.8□□□□□ -0.2
ClppO88696 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClppO88696 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClppO88696 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClppO88696 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClppO88696 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClppO88696 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ClppO88696 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClppO88696 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClppO88696 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClppO88696 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ClppO88696 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClppO88696 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms