Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC18.1■□□□□ 0.49
Nid2O88322 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nid2O88322 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC18.1■□□□□ 0.49
Nid2O88322 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC18.1■□□□□ 0.49
Nid2O88322 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC18.1■□□□□ 0.49
Nid2O88322 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nid2O88322 Gm37466-201ENSMUST00000195692 652 ntBASIC18.1■□□□□ 0.49
Nid2O88322 Gm17330-201ENSMUST00000221047 165 ntBASIC18.1■□□□□ 0.49
Nid2O88322 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nid2O88322 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nid2O88322 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nid2O88322 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nid2O88322 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nid2O88322 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nid2O88322 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Nid2O88322 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nid2O88322 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Nid2O88322 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC18.1■□□□□ 0.49
Nid2O88322 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC18.1■□□□□ 0.49
Nid2O88322 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nid2O88322 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nid2O88322 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nid2O88322 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Nid2O88322 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nid2O88322 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nid2O88322 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nid2O88322 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nid2O88322 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC18.09■□□□□ 0.49
Nid2O88322 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nid2O88322 Gm11618-201ENSMUST00000117946 267 ntBASIC18.09■□□□□ 0.49
Nid2O88322 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nid2O88322 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nid2O88322 Gm9368-201ENSMUST00000219348 831 ntBASIC18.09■□□□□ 0.49
Nid2O88322 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC18.09■□□□□ 0.49
Nid2O88322 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nid2O88322 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nid2O88322 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nid2O88322 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nid2O88322 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
Nid2O88322 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nid2O88322 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC18.09■□□□□ 0.49
Nid2O88322 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nid2O88322 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nid2O88322 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Nid2O88322 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nid2O88322 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Nid2O88322 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC18.09■□□□□ 0.49
Nid2O88322 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nid2O88322 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC18.09■□□□□ 0.49
Nid2O88322 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nid2O88322 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Nid2O88322 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.08■□□□□ 0.49
Nid2O88322 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nid2O88322 Gm12537-201ENSMUST00000119266 1002 ntBASIC18.08■□□□□ 0.49
Nid2O88322 Gm12070-201ENSMUST00000119551 1002 ntBASIC18.08■□□□□ 0.49
Nid2O88322 Gm12671-201ENSMUST00000119978 1002 ntBASIC18.08■□□□□ 0.49
Nid2O88322 Gm13292-201ENSMUST00000120014 1000 ntBASIC18.08■□□□□ 0.49
Nid2O88322 Gm11658-201ENSMUST00000120913 1008 ntBASIC18.08■□□□□ 0.49
Nid2O88322 Gm12403-201ENSMUST00000121384 959 ntBASIC18.08■□□□□ 0.49
Nid2O88322 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Nid2O88322 Mir3547-201ENSMUST00000175461 88 ntBASIC18.08■□□□□ 0.49
Nid2O88322 Gm10359-201ENSMUST00000180167 1002 ntBASIC18.08■□□□□ 0.49
Nid2O88322 Gm12033-201ENSMUST00000180654 1002 ntBASIC18.08■□□□□ 0.49
Nid2O88322 Gm5559-201ENSMUST00000180755 1002 ntBASIC18.08■□□□□ 0.49
Nid2O88322 Gm2467-201ENSMUST00000182266 1010 ntBASIC18.08■□□□□ 0.49
Nid2O88322 Gm6981-201ENSMUST00000182467 1008 ntBASIC18.08■□□□□ 0.49
Nid2O88322 Gm4335-201ENSMUST00000182581 1004 ntBASIC18.08■□□□□ 0.49
Nid2O88322 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC18.08■□□□□ 0.49
Nid2O88322 Gm7895-201ENSMUST00000187459 1173 ntBASIC18.08■□□□□ 0.49
Nid2O88322 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC18.08■□□□□ 0.49
Nid2O88322 Gm45865-201ENSMUST00000211815 945 ntBASIC18.08■□□□□ 0.49
Nid2O88322 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC18.08■□□□□ 0.49
Nid2O88322 AC134335.2-201ENSMUST00000227660 440 ntBASIC18.08■□□□□ 0.49
Nid2O88322 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nid2O88322 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nid2O88322 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nid2O88322 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Nid2O88322 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Nid2O88322 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Nid2O88322 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Nid2O88322 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nid2O88322 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC18.08■□□□□ 0.48
Nid2O88322 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nid2O88322 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Nid2O88322 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nid2O88322 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nid2O88322 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC18.08■□□□□ 0.48
Nid2O88322 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nid2O88322 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nid2O88322 Gm44645-201ENSMUST00000205492 1653 ntBASIC18.08■□□□□ 0.48
Nid2O88322 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nid2O88322 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Nid2O88322 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Nid2O88322 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Nid2O88322 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Nid2O88322 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Nid2O88322 AC093022.1-201ENSMUST00000226949 1072 ntBASIC18.07■□□□□ 0.48
Nid2O88322 Gm10146-201ENSMUST00000072739 309 ntBASIC18.07■□□□□ 0.48
Nid2O88322 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nid2O88322 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms