Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ldb2O55203 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb2O55203 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb2O55203 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb2O55203 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb2O55203 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb2O55203 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb2O55203 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb2O55203 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb2O55203 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb2O55203 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ldb2O55203 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.03□□□□□ -0.16
Ldb2O55203 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb2O55203 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.03□□□□□ -0.16
Ldb2O55203 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Ldb2O55203 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ldb2O55203 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb2O55203 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb2O55203 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.03□□□□□ -0.16
Ldb2O55203 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb2O55203 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb2O55203 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb2O55203 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ldb2O55203 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb2O55203 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb2O55203 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb2O55203 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb2O55203 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb2O55203 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb2O55203 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ldb2O55203 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ldb2O55203 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.02□□□□□ -0.16
Ldb2O55203 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Ldb2O55203 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ldb2O55203 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ldb2O55203 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ldb2O55203 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ldb2O55203 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Ldb2O55203 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ldb2O55203 Gm15653-201ENSMUST00000119247 907 ntBASIC14.02□□□□□ -0.17
Ldb2O55203 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ldb2O55203 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ldb2O55203 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ldb2O55203 Auts2-212ENSMUST00000178555 309 ntBASIC14.02□□□□□ -0.17
Ldb2O55203 Mir6956-201ENSMUST00000183598 62 ntBASIC14.02□□□□□ -0.17
Ldb2O55203 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.02□□□□□ -0.17
Ldb2O55203 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.02□□□□□ -0.17
Ldb2O55203 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ldb2O55203 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ldb2O55203 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ldb2O55203 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ldb2O55203 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ldb2O55203 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ldb2O55203 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Ldb2O55203 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ldb2O55203 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ldb2O55203 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Ldb2O55203 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ldb2O55203 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ldb2O55203 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ldb2O55203 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ldb2O55203 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ldb2O55203 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ldb2O55203 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ldb2O55203 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ldb2O55203 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ldb2O55203 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Ldb2O55203 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ldb2O55203 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ldb2O55203 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ldb2O55203 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ldb2O55203 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ldb2O55203 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ldb2O55203 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ldb2O55203 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ldb2O55203 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ldb2O55203 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ldb2O55203 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.01□□□□□ -0.17
Ldb2O55203 Gm44872-201ENSMUST00000207864 420 ntBASIC14.01□□□□□ -0.17
Ldb2O55203 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ldb2O55203 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ldb2O55203 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ldb2O55203 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.01□□□□□ -0.17
Ldb2O55203 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Ldb2O55203 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.01□□□□□ -0.17
Ldb2O55203 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ldb2O55203 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ldb2O55203 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ldb2O55203 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ldb2O55203 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ldb2O55203 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ldb2O55203 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Ldb2O55203 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ldb2O55203 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ldb2O55203 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ldb2O55203 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ldb2O55203 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ldb2O55203 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ldb2O55203 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ldb2O55203 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms