Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pde6dO55057 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pde6dO55057 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pde6dO55057 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pde6dO55057 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pde6dO55057 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.11□□□□□ -0.63
Pde6dO55057 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pde6dO55057 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Pde6dO55057 Gm8668-201ENSMUST00000120559 1447 ntBASIC11.11□□□□□ -0.63
Pde6dO55057 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.11□□□□□ -0.63
Pde6dO55057 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pde6dO55057 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pde6dO55057 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pde6dO55057 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pde6dO55057 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pde6dO55057 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pde6dO55057 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pde6dO55057 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Pde6dO55057 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pde6dO55057 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pde6dO55057 Gm4691-201ENSMUST00000182339 1000 ntBASIC11.11□□□□□ -0.63
Pde6dO55057 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Pde6dO55057 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pde6dO55057 Gm2451-201ENSMUST00000199447 999 ntBASIC11.11□□□□□ -0.63
Pde6dO55057 Gm10290-201ENSMUST00000200451 999 ntBASIC11.11□□□□□ -0.63
Pde6dO55057 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pde6dO55057 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pde6dO55057 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pde6dO55057 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pde6dO55057 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pde6dO55057 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pde6dO55057 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.11□□□□□ -0.63
Pde6dO55057 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.11□□□□□ -0.63
Pde6dO55057 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC11.11□□□□□ -0.63
Pde6dO55057 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pde6dO55057 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pde6dO55057 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pde6dO55057 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Pde6dO55057 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Pde6dO55057 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pde6dO55057 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pde6dO55057 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Pde6dO55057 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.11□□□□□ -0.63
Pde6dO55057 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.11□□□□□ -0.63
Pde6dO55057 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC11.11□□□□□ -0.63
Pde6dO55057 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pde6dO55057 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Pde6dO55057 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pde6dO55057 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pde6dO55057 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pde6dO55057 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pde6dO55057 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pde6dO55057 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pde6dO55057 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pde6dO55057 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pde6dO55057 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pde6dO55057 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Pde6dO55057 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Pde6dO55057 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pde6dO55057 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pde6dO55057 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Pde6dO55057 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pde6dO55057 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pde6dO55057 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC11.1□□□□□ -0.63
Pde6dO55057 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pde6dO55057 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pde6dO55057 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pde6dO55057 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pde6dO55057 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC11.1□□□□□ -0.63
Pde6dO55057 Gm6345-202ENSMUST00000180900 204 ntBASIC11.1□□□□□ -0.63
Pde6dO55057 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC11.1□□□□□ -0.63
Pde6dO55057 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pde6dO55057 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pde6dO55057 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.1□□□□□ -0.63
Pde6dO55057 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pde6dO55057 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pde6dO55057 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pde6dO55057 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pde6dO55057 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pde6dO55057 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pde6dO55057 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Pde6dO55057 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Pde6dO55057 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pde6dO55057 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pde6dO55057 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pde6dO55057 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Pde6dO55057 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC11.09□□□□□ -0.63
Pde6dO55057 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Pde6dO55057 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pde6dO55057 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pde6dO55057 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Pde6dO55057 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pde6dO55057 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC11.09□□□□□ -0.63
Pde6dO55057 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.09□□□□□ -0.63
Pde6dO55057 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Pde6dO55057 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC11.09□□□□□ -0.63
Pde6dO55057 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pde6dO55057 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pde6dO55057 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pde6dO55057 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms