Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Rnf13O54965 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf13O54965 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.8□□□□□ -0.36
Rnf13O54965 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Rnf13O54965 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf13O54965 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf13O54965 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Rnf13O54965 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Rnf13O54965 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf13O54965 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf13O54965 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.8□□□□□ -0.36
Rnf13O54965 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf13O54965 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf13O54965 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.8□□□□□ -0.36
Rnf13O54965 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf13O54965 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf13O54965 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Rnf13O54965 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf13O54965 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf13O54965 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf13O54965 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf13O54965 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf13O54965 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf13O54965 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf13O54965 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.8□□□□□ -0.36
Rnf13O54965 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf13O54965 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf13O54965 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Rnf13O54965 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.79□□□□□ -0.36
Rnf13O54965 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf13O54965 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf13O54965 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf13O54965 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf13O54965 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf13O54965 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf13O54965 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf13O54965 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf13O54965 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Rnf13O54965 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf13O54965 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.79□□□□□ -0.36
Rnf13O54965 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.79□□□□□ -0.36
Rnf13O54965 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf13O54965 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC12.79□□□□□ -0.36
Rnf13O54965 Thap2-203ENSMUST00000218989 527 ntBASIC12.79□□□□□ -0.36
Rnf13O54965 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf13O54965 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf13O54965 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf13O54965 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.79□□□□□ -0.36
Rnf13O54965 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf13O54965 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf13O54965 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Rnf13O54965 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf13O54965 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf13O54965 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf13O54965 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Rnf13O54965 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf13O54965 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf13O54965 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf13O54965 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf13O54965 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf13O54965 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.78□□□□□ -0.36
Rnf13O54965 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf13O54965 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Rnf13O54965 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.78□□□□□ -0.36
Rnf13O54965 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf13O54965 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf13O54965 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf13O54965 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.78□□□□□ -0.36
Rnf13O54965 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.78□□□□□ -0.36
Rnf13O54965 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rnf13O54965 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rnf13O54965 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf13O54965 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf13O54965 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.78□□□□□ -0.36
Rnf13O54965 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf13O54965 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Rnf13O54965 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC12.78□□□□□ -0.36
Rnf13O54965 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.78□□□□□ -0.36
Rnf13O54965 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf13O54965 Gm10275-202ENSMUST00000168697 495 ntBASIC12.78□□□□□ -0.36
Rnf13O54965 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rnf13O54965 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
Rnf13O54965 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
Rnf13O54965 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.78□□□□□ -0.36
Rnf13O54965 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.78□□□□□ -0.36
Rnf13O54965 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.78□□□□□ -0.36
Rnf13O54965 Gm10275-201ENSMUST00000092620 635 ntBASIC12.78□□□□□ -0.36
Rnf13O54965 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf13O54965 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf13O54965 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf13O54965 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf13O54965 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf13O54965 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf13O54965 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rnf13O54965 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf13O54965 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf13O54965 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.78□□□□□ -0.36
Rnf13O54965 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf13O54965 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf13O54965 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms