Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Dkk1O54908 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Dkk1O54908 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Dkk1O54908 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Dkk1O54908 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Dkk1O54908 Gpr33-201ENSMUST00000040161 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Dkk1O54908 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Dkk1O54908 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Dkk1O54908 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Dkk1O54908 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Dkk1O54908 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Dkk1O54908 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Dkk1O54908 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Dkk1O54908 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Dkk1O54908 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Dkk1O54908 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Dkk1O54908 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.81□□□□□ -0.36
Dkk1O54908 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Dkk1O54908 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Dkk1O54908 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.81□□□□□ -0.36
Dkk1O54908 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Dkk1O54908 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Dkk1O54908 Gm9385-201ENSMUST00000117563 472 ntBASIC12.81□□□□□ -0.36
Dkk1O54908 Gm11320-201ENSMUST00000119434 463 ntBASIC12.81□□□□□ -0.36
Dkk1O54908 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.81□□□□□ -0.36
Dkk1O54908 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Dkk1O54908 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Dkk1O54908 Cd48-201ENSMUST00000015499 922 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Dkk1O54908 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Dkk1O54908 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.81□□□□□ -0.36
Dkk1O54908 Gm25911-201ENSMUST00000157621 56 ntBASIC12.81□□□□□ -0.36
Dkk1O54908 Gm16026-204ENSMUST00000162652 683 ntBASIC12.81□□□□□ -0.36
Dkk1O54908 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Dkk1O54908 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC12.81□□□□□ -0.36
Dkk1O54908 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC12.81□□□□□ -0.36
Dkk1O54908 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Dkk1O54908 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.81□□□□□ -0.36
Dkk1O54908 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Dkk1O54908 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Dkk1O54908 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC12.81□□□□□ -0.36
Dkk1O54908 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Dkk1O54908 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC12.81□□□□□ -0.36
Dkk1O54908 Gm42794-201ENSMUST00000197636 835 ntTSL 3 BASIC12.81□□□□□ -0.36
Dkk1O54908 Gm43186-201ENSMUST00000198130 824 ntBASIC12.81□□□□□ -0.36
Dkk1O54908 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.81□□□□□ -0.36
Dkk1O54908 Gm43460-201ENSMUST00000202491 1057 ntBASIC12.81□□□□□ -0.36
Dkk1O54908 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC12.81□□□□□ -0.36
Dkk1O54908 Gm7443-201ENSMUST00000206355 378 ntBASIC12.81□□□□□ -0.36
Dkk1O54908 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.81□□□□□ -0.36
Dkk1O54908 Gm18043-201ENSMUST00000216741 739 ntBASIC12.81□□□□□ -0.36
Dkk1O54908 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Dkk1O54908 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Dkk1O54908 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Dkk1O54908 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Dkk1O54908 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Dkk1O54908 Cypt2-201ENSMUST00000041758 697 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Dkk1O54908 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Dkk1O54908 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Dkk1O54908 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Dkk1O54908 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Dkk1O54908 Cks2-201ENSMUST00000075853 692 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Dkk1O54908 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Dkk1O54908 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Dkk1O54908 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.81□□□□□ -0.36
Dkk1O54908 Gm10154-201ENSMUST00000084445 354 ntBASIC12.81□□□□□ -0.36
Dkk1O54908 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Dkk1O54908 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Dkk1O54908 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Dkk1O54908 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Dkk1O54908 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.81□□□□□ -0.36
Dkk1O54908 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Dkk1O54908 Gm42766-201ENSMUST00000200233 1332 ntBASIC12.81□□□□□ -0.36
Dkk1O54908 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Dkk1O54908 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Dkk1O54908 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Dkk1O54908 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.81□□□□□ -0.36
Dkk1O54908 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Dkk1O54908 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Dkk1O54908 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Dkk1O54908 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Dkk1O54908 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Dkk1O54908 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Dkk1O54908 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Dkk1O54908 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Dkk1O54908 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Dkk1O54908 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Dkk1O54908 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Dkk1O54908 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Dkk1O54908 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Dkk1O54908 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Dkk1O54908 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Dkk1O54908 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Dkk1O54908 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Dkk1O54908 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Dkk1O54908 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.8□□□□□ -0.36
Dkk1O54908 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Dkk1O54908 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Dkk1O54908 Gm15427-201ENSMUST00000117288 531 ntBASIC12.8□□□□□ -0.36
Dkk1O54908 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.8□□□□□ -0.36
Dkk1O54908 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms