Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Matn3O35701 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.83□□□□□ -0.36
Matn3O35701 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC12.83□□□□□ -0.36
Matn3O35701 Gm11452-201ENSMUST00000122376 690 ntBASIC12.83□□□□□ -0.36
Matn3O35701 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.83□□□□□ -0.36
Matn3O35701 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12.83□□□□□ -0.36
Matn3O35701 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Matn3O35701 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Matn3O35701 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Matn3O35701 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Matn3O35701 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.83□□□□□ -0.36
Matn3O35701 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.83□□□□□ -0.36
Matn3O35701 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Matn3O35701 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.83□□□□□ -0.36
Matn3O35701 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Matn3O35701 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Matn3O35701 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Matn3O35701 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Matn3O35701 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Matn3O35701 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Matn3O35701 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Matn3O35701 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Matn3O35701 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Matn3O35701 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Matn3O35701 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Matn3O35701 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Matn3O35701 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Matn3O35701 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Matn3O35701 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Matn3O35701 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Matn3O35701 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Matn3O35701 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Matn3O35701 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Matn3O35701 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Matn3O35701 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Matn3O35701 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Matn3O35701 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Matn3O35701 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Matn3O35701 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Matn3O35701 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Matn3O35701 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Matn3O35701 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Matn3O35701 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Matn3O35701 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Matn3O35701 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC12.82□□□□□ -0.36
Matn3O35701 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.82□□□□□ -0.36
Matn3O35701 Gm6296-201ENSMUST00000222599 943 ntBASIC12.82□□□□□ -0.36
Matn3O35701 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.82□□□□□ -0.36
Matn3O35701 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Matn3O35701 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Matn3O35701 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Matn3O35701 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Matn3O35701 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Matn3O35701 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Matn3O35701 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Matn3O35701 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Matn3O35701 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.82□□□□□ -0.36
Matn3O35701 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Matn3O35701 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Matn3O35701 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Matn3O35701 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Matn3O35701 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Matn3O35701 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Matn3O35701 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Matn3O35701 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Matn3O35701 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Matn3O35701 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Matn3O35701 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Matn3O35701 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Matn3O35701 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Matn3O35701 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Matn3O35701 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Matn3O35701 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Matn3O35701 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Matn3O35701 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.81□□□□□ -0.36
Matn3O35701 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Matn3O35701 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Matn3O35701 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Matn3O35701 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Matn3O35701 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.81□□□□□ -0.36
Matn3O35701 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Matn3O35701 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Matn3O35701 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Matn3O35701 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Matn3O35701 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Matn3O35701 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Matn3O35701 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.81□□□□□ -0.36
Matn3O35701 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Matn3O35701 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.81□□□□□ -0.36
Matn3O35701 Gm2451-201ENSMUST00000199447 999 ntBASIC12.81□□□□□ -0.36
Matn3O35701 Gm10290-201ENSMUST00000200451 999 ntBASIC12.81□□□□□ -0.36
Matn3O35701 Gm9449-201ENSMUST00000207265 1011 ntBASIC12.81□□□□□ -0.36
Matn3O35701 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.81□□□□□ -0.36
Matn3O35701 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Matn3O35701 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Matn3O35701 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Matn3O35701 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Matn3O35701 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Matn3O35701 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.81□□□□□ -0.36
Matn3O35701 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms