Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf2O35218 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf2O35218 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf2O35218 AC121805.2-201ENSMUST00000218808 2538 ntBASIC15.1■□□□□ 0.01
Cpsf2O35218 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf2O35218 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf2O35218 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
Cpsf2O35218 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf2O35218 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf2O35218 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf2O35218 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf2O35218 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf2O35218 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf2O35218 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Cpsf2O35218 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.1■□□□□ 0.01
Cpsf2O35218 Gm10275-202ENSMUST00000168697 495 ntBASIC15.1■□□□□ 0.01
Cpsf2O35218 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf2O35218 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf2O35218 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf2O35218 Gm10275-201ENSMUST00000092620 635 ntBASIC15.1■□□□□ 0.01
Cpsf2O35218 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf2O35218 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf2O35218 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Cpsf2O35218 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf2O35218 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Cpsf2O35218 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Cpsf2O35218 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf2O35218 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Cpsf2O35218 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Cpsf2O35218 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf2O35218 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf2O35218 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf2O35218 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf2O35218 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Cpsf2O35218 Gm5639-201ENSMUST00000122305 2403 ntBASIC15.09■□□□□ 0.01
Cpsf2O35218 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Cpsf2O35218 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf2O35218 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf2O35218 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf2O35218 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf2O35218 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf2O35218 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf2O35218 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15.09■□□□□ 0.01
Cpsf2O35218 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf2O35218 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf2O35218 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf2O35218 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf2O35218 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.09■□□□□ 0.01
Cpsf2O35218 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf2O35218 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf2O35218 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.09■□□□□ 0.01
Cpsf2O35218 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf2O35218 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
Cpsf2O35218 Mir3113-201ENSMUST00000175478 76 ntBASIC15.09■□□□□ 0.01
Cpsf2O35218 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.09■□□□□ 0.01
Cpsf2O35218 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.09■□□□□ 0.01
Cpsf2O35218 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf2O35218 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf2O35218 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Cpsf2O35218 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf2O35218 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Cpsf2O35218 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf2O35218 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Cpsf2O35218 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf2O35218 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf2O35218 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf2O35218 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Cpsf2O35218 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.09■□□□□ 0.01
Cpsf2O35218 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf2O35218 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf2O35218 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf2O35218 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Cpsf2O35218 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.09■□□□□ 0.01
Cpsf2O35218 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.09■□□□□ 0.01
Cpsf2O35218 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf2O35218 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf2O35218 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.09■□□□□ 0.01
Cpsf2O35218 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf2O35218 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf2O35218 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cpsf2O35218 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cpsf2O35218 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cpsf2O35218 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cpsf2O35218 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cpsf2O35218 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cpsf2O35218 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cpsf2O35218 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cpsf2O35218 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cpsf2O35218 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Cpsf2O35218 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cpsf2O35218 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cpsf2O35218 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cpsf2O35218 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Cpsf2O35218 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.08■□□□□ 0
Cpsf2O35218 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cpsf2O35218 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Cpsf2O35218 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cpsf2O35218 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cpsf2O35218 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cpsf2O35218 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms