Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.5□□□□□ -0.09
Trove2O08848 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trove2O08848 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trove2O08848 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trove2O08848 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.5□□□□□ -0.09
Trove2O08848 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Trove2O08848 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trove2O08848 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trove2O08848 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.5□□□□□ -0.09
Trove2O08848 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trove2O08848 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.5□□□□□ -0.09
Trove2O08848 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trove2O08848 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trove2O08848 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trove2O08848 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trove2O08848 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trove2O08848 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trove2O08848 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trove2O08848 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trove2O08848 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trove2O08848 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trove2O08848 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trove2O08848 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.5□□□□□ -0.09
Trove2O08848 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trove2O08848 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trove2O08848 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trove2O08848 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trove2O08848 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trove2O08848 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trove2O08848 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Trove2O08848 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trove2O08848 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trove2O08848 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Trove2O08848 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trove2O08848 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trove2O08848 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trove2O08848 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trove2O08848 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trove2O08848 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trove2O08848 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trove2O08848 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.49□□□□□ -0.09
Trove2O08848 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trove2O08848 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.49□□□□□ -0.09
Trove2O08848 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trove2O08848 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trove2O08848 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trove2O08848 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trove2O08848 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trove2O08848 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trove2O08848 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trove2O08848 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trove2O08848 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trove2O08848 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trove2O08848 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trove2O08848 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trove2O08848 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trove2O08848 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trove2O08848 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trove2O08848 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trove2O08848 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.49□□□□□ -0.09
Trove2O08848 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trove2O08848 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trove2O08848 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trove2O08848 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trove2O08848 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trove2O08848 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trove2O08848 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Trove2O08848 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.48□□□□□ -0.09
Trove2O08848 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trove2O08848 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trove2O08848 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trove2O08848 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trove2O08848 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
Trove2O08848 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.48□□□□□ -0.09
Trove2O08848 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trove2O08848 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trove2O08848 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.48□□□□□ -0.09
Trove2O08848 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.48□□□□□ -0.09
Trove2O08848 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.48□□□□□ -0.09
Trove2O08848 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.48□□□□□ -0.09
Trove2O08848 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Trove2O08848 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trove2O08848 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trove2O08848 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trove2O08848 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.48□□□□□ -0.09
Trove2O08848 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trove2O08848 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trove2O08848 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trove2O08848 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Trove2O08848 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trove2O08848 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.48□□□□□ -0.09
Trove2O08848 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trove2O08848 Gm37105-201ENSMUST00000192251 2085 ntBASIC14.48□□□□□ -0.09
Trove2O08848 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trove2O08848 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trove2O08848 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trove2O08848 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trove2O08848 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trove2O08848 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trove2O08848 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms