Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28043E0CXC2 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28043E0CXC2 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.17□□□□□ -0.14
Gm28043E0CXC2 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28043E0CXC2 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28043E0CXC2 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28043E0CXC2 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28043E0CXC2 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28043E0CXC2 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.17□□□□□ -0.14
Gm28043E0CXC2 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28043E0CXC2 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28043E0CXC2 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Gm28043E0CXC2 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28043E0CXC2 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.17□□□□□ -0.14
Gm28043E0CXC2 Gm17271-201ENSMUST00000165535 355 ntBASIC14.17□□□□□ -0.14
Gm28043E0CXC2 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.17□□□□□ -0.14
Gm28043E0CXC2 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28043E0CXC2 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.17□□□□□ -0.14
Gm28043E0CXC2 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28043E0CXC2 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Gm28043E0CXC2 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28043E0CXC2 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28043E0CXC2 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28043E0CXC2 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28043E0CXC2 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28043E0CXC2 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28043E0CXC2 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28043E0CXC2 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28043E0CXC2 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28043E0CXC2 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.16□□□□□ -0.14
Gm28043E0CXC2 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28043E0CXC2 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Gm28043E0CXC2 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28043E0CXC2 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Gm28043E0CXC2 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28043E0CXC2 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28043E0CXC2 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28043E0CXC2 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28043E0CXC2 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28043E0CXC2 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28043E0CXC2 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Gm28043E0CXC2 Rpph1-201ENSMUST00000175096 319 ntBASIC14.16□□□□□ -0.14
Gm28043E0CXC2 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28043E0CXC2 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28043E0CXC2 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.16□□□□□ -0.14
Gm28043E0CXC2 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.16□□□□□ -0.14
Gm28043E0CXC2 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.16□□□□□ -0.14
Gm28043E0CXC2 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.16□□□□□ -0.14
Gm28043E0CXC2 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Gm28043E0CXC2 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28043E0CXC2 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.16□□□□□ -0.14
Gm28043E0CXC2 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28043E0CXC2 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28043E0CXC2 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28043E0CXC2 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.16□□□□□ -0.14
Gm28043E0CXC2 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28043E0CXC2 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Gm28043E0CXC2 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28043E0CXC2 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28043E0CXC2 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28043E0CXC2 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28043E0CXC2 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28043E0CXC2 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28043E0CXC2 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28043E0CXC2 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28043E0CXC2 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28043E0CXC2 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28043E0CXC2 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28043E0CXC2 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Gm28043E0CXC2 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28043E0CXC2 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28043E0CXC2 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28043E0CXC2 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28043E0CXC2 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28043E0CXC2 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.15□□□□□ -0.14
Gm28043E0CXC2 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28043E0CXC2 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.15□□□□□ -0.14
Gm28043E0CXC2 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.15□□□□□ -0.14
Gm28043E0CXC2 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Gm28043E0CXC2 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28043E0CXC2 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28043E0CXC2 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Gm28043E0CXC2 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28043E0CXC2 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28043E0CXC2 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28043E0CXC2 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28043E0CXC2 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.15□□□□□ -0.14
Gm28043E0CXC2 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28043E0CXC2 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28043E0CXC2 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28043E0CXC2 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28043E0CXC2 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28043E0CXC2 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28043E0CXC2 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28043E0CXC2 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Gm28043E0CXC2 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28043E0CXC2 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28043E0CXC2 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28043E0CXC2 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28043E0CXC2 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms