Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ubr4A2AN08 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ubr4A2AN08 Gm43702-201ENSMUST00000198772 2546 ntBASIC7.26□□□□□ -1.25
Ubr4A2AN08 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ubr4A2AN08 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Gm14274-201ENSMUST00000117182 615 ntBASIC7.25□□□□□ -1.25
Ubr4A2AN08 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Gm29608-201ENSMUST00000190444 463 ntBASIC7.25□□□□□ -1.25
Ubr4A2AN08 Gm45500-201ENSMUST00000211676 803 ntBASIC7.25□□□□□ -1.25
Ubr4A2AN08 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ubr4A2AN08 AC159195.1-201ENSMUST00000225867 2086 ntBASIC7.25□□□□□ -1.25
Ubr4A2AN08 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ubr4A2AN08 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ubr4A2AN08 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Gm9358-201ENSMUST00000183067 927 ntBASIC7.25□□□□□ -1.25
Ubr4A2AN08 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ubr4A2AN08 AC123061.1-201ENSMUST00000228021 999 ntBASIC7.25□□□□□ -1.25
Ubr4A2AN08 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Gm42901-201ENSMUST00000197735 3171 ntBASIC7.25□□□□□ -1.25
Ubr4A2AN08 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Gm8615-201ENSMUST00000025307 771 ntBASIC7.25□□□□□ -1.25
Ubr4A2AN08 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ubr4A2AN08 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Gm7848-201ENSMUST00000210739 718 ntBASIC7.25□□□□□ -1.25
Ubr4A2AN08 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ubr4A2AN08 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC7.24□□□□□ -1.25
Ubr4A2AN08 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ubr4A2AN08 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC7.24□□□□□ -1.25
Ubr4A2AN08 Gm14608-201ENSMUST00000120030 1553 ntBASIC7.24□□□□□ -1.25
Ubr4A2AN08 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ubr4A2AN08 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Ubr4A2AN08 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ubr4A2AN08 Gm26361-201ENSMUST00000158868 186 ntBASIC7.24□□□□□ -1.25
Ubr4A2AN08 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC7.24□□□□□ -1.25
Ubr4A2AN08 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC7.24□□□□□ -1.25
Ubr4A2AN08 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC7.24□□□□□ -1.25
Ubr4A2AN08 Gm9463-201ENSMUST00000206707 601 ntBASIC7.24□□□□□ -1.25
Ubr4A2AN08 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ubr4A2AN08 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ubr4A2AN08 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ubr4A2AN08 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ubr4A2AN08 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ubr4A2AN08 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Ubr4A2AN08 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC7.24□□□□□ -1.25
Ubr4A2AN08 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ubr4A2AN08 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ubr4A2AN08 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Ubr4A2AN08 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC7.24□□□□□ -1.25
Ubr4A2AN08 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC7.24□□□□□ -1.25
Ubr4A2AN08 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ubr4A2AN08 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ubr4A2AN08 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ubr4A2AN08 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ubr4A2AN08 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ubr4A2AN08 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Ubr4A2AN08 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ubr4A2AN08 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ubr4A2AN08 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC7.24□□□□□ -1.25
Ubr4A2AN08 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ubr4A2AN08 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Ubr4A2AN08 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC7.24□□□□□ -1.25
Ubr4A2AN08 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC7.24□□□□□ -1.25
Ubr4A2AN08 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms