Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Trav9n-2A0A0G2JDP3 AC102291.3-201ENSMUST00000226566 405 ntBASIC10.28□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav9n-2A0A0G2JDP3 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Gm10275-201ENSMUST00000092620 635 ntBASIC10.28□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC10.28□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav9n-2A0A0G2JDP3 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC10.28□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC10.27□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav9n-2A0A0G2JDP3 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC10.27□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC10.27□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC10.27□□□□□ -0.77
Trav9n-2A0A0G2JDP3 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC10.27□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC10.27□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.77
Trav9n-2A0A0G2JDP3 AC158529.1-201ENSMUST00000223618 239 ntBASIC10.27□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC10.27□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC10.27□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Trav9n-2A0A0G2JDP3 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC10.26□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm37912-201ENSMUST00000191895 3076 ntBASIC10.26□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC10.26□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC10.26□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm44335-201ENSMUST00000196879 141 ntBASIC10.26□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm44297-201ENSMUST00000198304 141 ntBASIC10.26□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm44346-201ENSMUST00000198851 141 ntBASIC10.26□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm43125-201ENSMUST00000201724 730 ntBASIC10.26□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms