Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn3Q9Z0G9 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn3Q9Z0G9 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cldn3Q9Z0G9 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn3Q9Z0G9 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn3Q9Z0G9 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn3Q9Z0G9 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn3Q9Z0G9 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn3Q9Z0G9 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn3Q9Z0G9 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cldn3Q9Z0G9 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.33□□□□□ -0.12
Cldn3Q9Z0G9 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn3Q9Z0G9 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn3Q9Z0G9 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn3Q9Z0G9 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 Gm22175-201ENSMUST00000175007 78 ntBASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 Gm28630-201ENSMUST00000187806 498 ntBASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn3Q9Z0G9 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn3Q9Z0G9 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn3Q9Z0G9 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn3Q9Z0G9 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn3Q9Z0G9 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cldn3Q9Z0G9 Gm24543-201ENSMUST00000103867 82 ntBASIC14.31□□□□□ -0.12
Cldn3Q9Z0G9 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.31□□□□□ -0.12
Cldn3Q9Z0G9 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn3Q9Z0G9 Gm13616-201ENSMUST00000120600 222 ntBASIC14.31□□□□□ -0.12
Cldn3Q9Z0G9 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.31□□□□□ -0.12
Cldn3Q9Z0G9 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cldn3Q9Z0G9 Gm27622-201ENSMUST00000183779 60 ntBASIC14.31□□□□□ -0.12
Cldn3Q9Z0G9 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.31□□□□□ -0.12
Cldn3Q9Z0G9 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.31□□□□□ -0.12
Cldn3Q9Z0G9 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.31□□□□□ -0.12
Cldn3Q9Z0G9 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cldn3Q9Z0G9 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn3Q9Z0G9 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn3Q9Z0G9 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cldn3Q9Z0G9 Mir125a-201ENSMUST00000083545 68 ntBASIC14.31□□□□□ -0.12
Cldn3Q9Z0G9 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn3Q9Z0G9 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.31□□□□□ -0.12
Cldn3Q9Z0G9 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn3Q9Z0G9 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn3Q9Z0G9 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn3Q9Z0G9 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Cldn3Q9Z0G9 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Cldn3Q9Z0G9 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cldn3Q9Z0G9 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.31□□□□□ -0.12
Cldn3Q9Z0G9 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn3Q9Z0G9 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn3Q9Z0G9 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cldn3Q9Z0G9 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn3Q9Z0G9 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn3Q9Z0G9 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn3Q9Z0G9 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn3Q9Z0G9 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn3Q9Z0G9 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn3Q9Z0G9 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.3□□□□□ -0.12
Cldn3Q9Z0G9 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn3Q9Z0G9 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Cldn3Q9Z0G9 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Cldn3Q9Z0G9 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.3□□□□□ -0.12
Cldn3Q9Z0G9 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms