Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ClcnkaQ9WUB7 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.04□□□□□ -0.32
ClcnkaQ9WUB7 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
ClcnkaQ9WUB7 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
ClcnkaQ9WUB7 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ClcnkaQ9WUB7 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ClcnkaQ9WUB7 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
ClcnkaQ9WUB7 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.04□□□□□ -0.32
ClcnkaQ9WUB7 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ClcnkaQ9WUB7 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ClcnkaQ9WUB7 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClcnkaQ9WUB7 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ClcnkaQ9WUB7 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClcnkaQ9WUB7 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
ClcnkaQ9WUB7 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClcnkaQ9WUB7 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClcnkaQ9WUB7 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ClcnkaQ9WUB7 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
ClcnkaQ9WUB7 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClcnkaQ9WUB7 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClcnkaQ9WUB7 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClcnkaQ9WUB7 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClcnkaQ9WUB7 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClcnkaQ9WUB7 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.03□□□□□ -0.32
ClcnkaQ9WUB7 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.03□□□□□ -0.32
ClcnkaQ9WUB7 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
ClcnkaQ9WUB7 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.03□□□□□ -0.32
ClcnkaQ9WUB7 Gm18049-201ENSMUST00000208909 581 ntBASIC13.03□□□□□ -0.32
ClcnkaQ9WUB7 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClcnkaQ9WUB7 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
ClcnkaQ9WUB7 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ClcnkaQ9WUB7 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ClcnkaQ9WUB7 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ClcnkaQ9WUB7 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClcnkaQ9WUB7 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.03□□□□□ -0.32
ClcnkaQ9WUB7 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClcnkaQ9WUB7 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClcnkaQ9WUB7 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ClcnkaQ9WUB7 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ClcnkaQ9WUB7 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClcnkaQ9WUB7 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClcnkaQ9WUB7 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClcnkaQ9WUB7 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
ClcnkaQ9WUB7 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
ClcnkaQ9WUB7 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
ClcnkaQ9WUB7 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClcnkaQ9WUB7 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClcnkaQ9WUB7 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClcnkaQ9WUB7 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ClcnkaQ9WUB7 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ClcnkaQ9WUB7 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
ClcnkaQ9WUB7 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ClcnkaQ9WUB7 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.32
ClcnkaQ9WUB7 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ClcnkaQ9WUB7 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ClcnkaQ9WUB7 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
ClcnkaQ9WUB7 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ClcnkaQ9WUB7 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ClcnkaQ9WUB7 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Gm22065-201ENSMUST00000103753 110 ntBASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Gm22066-201ENSMUST00000103761 110 ntBASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Gm24932-201ENSMUST00000103763 110 ntBASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Gm24115-201ENSMUST00000103799 110 ntBASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Gm22190-201ENSMUST00000103827 110 ntBASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Gm22191-201ENSMUST00000103831 110 ntBASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Gm24721-201ENSMUST00000103849 110 ntBASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Gm28018-201ENSMUST00000103869 110 ntBASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Gm26399-201ENSMUST00000103937 110 ntBASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Gm13015-201ENSMUST00000118674 204 ntBASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Gm24158-201ENSMUST00000175263 71 ntBASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Gm25349-201ENSMUST00000177728 110 ntBASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Gm23616-201ENSMUST00000177797 110 ntBASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Gm25871-201ENSMUST00000177816 110 ntBASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Gm24752-201ENSMUST00000178240 110 ntBASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Gm24496-201ENSMUST00000178287 110 ntBASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Gm25649-201ENSMUST00000178476 110 ntBASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Gm25548-201ENSMUST00000178681 110 ntBASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Gm23147-201ENSMUST00000178841 110 ntBASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Gm26095-201ENSMUST00000179270 110 ntBASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Gm22171-201ENSMUST00000179283 110 ntBASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Gm23936-201ENSMUST00000179354 110 ntBASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Gm22619-201ENSMUST00000179516 110 ntBASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Gm25255-201ENSMUST00000179579 110 ntBASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Gm24755-201ENSMUST00000179691 110 ntBASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Gm26506-201ENSMUST00000179692 110 ntBASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Gm25086-201ENSMUST00000179931 110 ntBASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Gm23243-201ENSMUST00000180047 110 ntBASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Gm24659-201ENSMUST00000180212 110 ntBASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Gm24169-201ENSMUST00000180244 110 ntBASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Gm23689-201ENSMUST00000180354 110 ntBASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Gm27359-201ENSMUST00000184153 110 ntBASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Gm27785-201ENSMUST00000184268 110 ntBASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Gm27466-201ENSMUST00000184396 110 ntBASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Gm27703-201ENSMUST00000184836 110 ntBASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms