Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf4Q9QZS2 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Rnf4Q9QZS2 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.28□□□□□ -0.12
Rnf4Q9QZS2 Gm11780-201ENSMUST00000136880 516 ntBASIC14.28□□□□□ -0.12
Rnf4Q9QZS2 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.28□□□□□ -0.12
Rnf4Q9QZS2 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf4Q9QZS2 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf4Q9QZS2 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf4Q9QZS2 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf4Q9QZS2 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.28□□□□□ -0.12
Rnf4Q9QZS2 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.28□□□□□ -0.12
Rnf4Q9QZS2 Gm17971-201ENSMUST00000190239 806 ntBASIC14.28□□□□□ -0.12
Rnf4Q9QZS2 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.28□□□□□ -0.12
Rnf4Q9QZS2 Gm37153-201ENSMUST00000193637 231 ntBASIC14.28□□□□□ -0.12
Rnf4Q9QZS2 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf4Q9QZS2 Gm9182-201ENSMUST00000217829 639 ntBASIC14.28□□□□□ -0.12
Rnf4Q9QZS2 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.28□□□□□ -0.12
Rnf4Q9QZS2 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.28□□□□□ -0.12
Rnf4Q9QZS2 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf4Q9QZS2 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf4Q9QZS2 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf4Q9QZS2 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf4Q9QZS2 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf4Q9QZS2 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf4Q9QZS2 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf4Q9QZS2 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
Rnf4Q9QZS2 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf4Q9QZS2 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf4Q9QZS2 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Rnf4Q9QZS2 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf4Q9QZS2 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf4Q9QZS2 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf4Q9QZS2 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf4Q9QZS2 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf4Q9QZS2 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf4Q9QZS2 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf4Q9QZS2 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf4Q9QZS2 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.27□□□□□ -0.12
Rnf4Q9QZS2 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf4Q9QZS2 Gm7284-201ENSMUST00000131667 944 ntBASIC14.27□□□□□ -0.13
Rnf4Q9QZS2 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.27□□□□□ -0.13
Rnf4Q9QZS2 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.27□□□□□ -0.13
Rnf4Q9QZS2 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf4Q9QZS2 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf4Q9QZS2 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf4Q9QZS2 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf4Q9QZS2 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Rnf4Q9QZS2 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf4Q9QZS2 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Rnf4Q9QZS2 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf4Q9QZS2 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Rnf4Q9QZS2 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.27□□□□□ -0.13
Rnf4Q9QZS2 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf4Q9QZS2 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf4Q9QZS2 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf4Q9QZS2 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf4Q9QZS2 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Rnf4Q9QZS2 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf4Q9QZS2 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf4Q9QZS2 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf4Q9QZS2 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf4Q9QZS2 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf4Q9QZS2 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf4Q9QZS2 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf4Q9QZS2 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf4Q9QZS2 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf4Q9QZS2 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf4Q9QZS2 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf4Q9QZS2 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf4Q9QZS2 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf4Q9QZS2 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.26□□□□□ -0.13
Rnf4Q9QZS2 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf4Q9QZS2 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.26□□□□□ -0.13
Rnf4Q9QZS2 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.26□□□□□ -0.13
Rnf4Q9QZS2 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rnf4Q9QZS2 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf4Q9QZS2 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Rnf4Q9QZS2 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf4Q9QZS2 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.26□□□□□ -0.13
Rnf4Q9QZS2 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rnf4Q9QZS2 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf4Q9QZS2 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf4Q9QZS2 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf4Q9QZS2 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf4Q9QZS2 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.26□□□□□ -0.13
Rnf4Q9QZS2 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf4Q9QZS2 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf4Q9QZS2 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf4Q9QZS2 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf4Q9QZS2 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf4Q9QZS2 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf4Q9QZS2 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rnf4Q9QZS2 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.25□□□□□ -0.13
Rnf4Q9QZS2 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rnf4Q9QZS2 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf4Q9QZS2 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.25□□□□□ -0.13
Rnf4Q9QZS2 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf4Q9QZS2 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Rnf4Q9QZS2 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf4Q9QZS2 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms