Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Upk3aQ9JKX8 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upk3aQ9JKX8 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upk3aQ9JKX8 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upk3aQ9JKX8 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Upk3aQ9JKX8 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upk3aQ9JKX8 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Upk3aQ9JKX8 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Upk3aQ9JKX8 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upk3aQ9JKX8 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upk3aQ9JKX8 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Upk3aQ9JKX8 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upk3aQ9JKX8 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upk3aQ9JKX8 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upk3aQ9JKX8 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Upk3aQ9JKX8 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Upk3aQ9JKX8 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.58□□□□□ -0.23
Upk3aQ9JKX8 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Upk3aQ9JKX8 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Upk3aQ9JKX8 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Upk3aQ9JKX8 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk3aQ9JKX8 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk3aQ9JKX8 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Upk3aQ9JKX8 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.58□□□□□ -0.24
Upk3aQ9JKX8 Gm12151-201ENSMUST00000121374 290 ntBASIC13.58□□□□□ -0.24
Upk3aQ9JKX8 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.58□□□□□ -0.24
Upk3aQ9JKX8 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk3aQ9JKX8 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk3aQ9JKX8 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.58□□□□□ -0.24
Upk3aQ9JKX8 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Upk3aQ9JKX8 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.58□□□□□ -0.24
Upk3aQ9JKX8 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.58□□□□□ -0.24
Upk3aQ9JKX8 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Upk3aQ9JKX8 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk3aQ9JKX8 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk3aQ9JKX8 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk3aQ9JKX8 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk3aQ9JKX8 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk3aQ9JKX8 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Upk3aQ9JKX8 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Upk3aQ9JKX8 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.58□□□□□ -0.24
Upk3aQ9JKX8 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk3aQ9JKX8 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.58□□□□□ -0.24
Upk3aQ9JKX8 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk3aQ9JKX8 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3aQ9JKX8 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3aQ9JKX8 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Upk3aQ9JKX8 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3aQ9JKX8 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Upk3aQ9JKX8 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.57□□□□□ -0.24
Upk3aQ9JKX8 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3aQ9JKX8 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3aQ9JKX8 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3aQ9JKX8 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3aQ9JKX8 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3aQ9JKX8 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3aQ9JKX8 Gm10766-202ENSMUST00000194123 606 ntBASIC13.57□□□□□ -0.24
Upk3aQ9JKX8 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3aQ9JKX8 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Upk3aQ9JKX8 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3aQ9JKX8 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Upk3aQ9JKX8 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Upk3aQ9JKX8 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3aQ9JKX8 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3aQ9JKX8 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3aQ9JKX8 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3aQ9JKX8 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3aQ9JKX8 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3aQ9JKX8 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3aQ9JKX8 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.57□□□□□ -0.24
Upk3aQ9JKX8 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3aQ9JKX8 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3aQ9JKX8 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3aQ9JKX8 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3aQ9JKX8 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk3aQ9JKX8 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.56□□□□□ -0.24
Upk3aQ9JKX8 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk3aQ9JKX8 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.56□□□□□ -0.24
Upk3aQ9JKX8 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Upk3aQ9JKX8 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Upk3aQ9JKX8 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk3aQ9JKX8 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk3aQ9JKX8 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk3aQ9JKX8 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk3aQ9JKX8 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk3aQ9JKX8 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk3aQ9JKX8 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Upk3aQ9JKX8 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.56□□□□□ -0.24
Upk3aQ9JKX8 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.56□□□□□ -0.24
Upk3aQ9JKX8 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.56□□□□□ -0.24
Upk3aQ9JKX8 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk3aQ9JKX8 Gm4804-201ENSMUST00000182234 999 ntBASIC13.56□□□□□ -0.24
Upk3aQ9JKX8 Gm29741-201ENSMUST00000192667 421 ntBASIC13.56□□□□□ -0.24
Upk3aQ9JKX8 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.56□□□□□ -0.24
Upk3aQ9JKX8 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.56□□□□□ -0.24
Upk3aQ9JKX8 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Upk3aQ9JKX8 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.56□□□□□ -0.24
Upk3aQ9JKX8 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk3aQ9JKX8 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk3aQ9JKX8 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms