Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1fQ9JIS7 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15.82■□□□□ 0.12
Cacna1fQ9JIS7 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Cacna1fQ9JIS7 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1fQ9JIS7 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Cacna1fQ9JIS7 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC15.82■□□□□ 0.12
Cacna1fQ9JIS7 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1fQ9JIS7 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1fQ9JIS7 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cacna1fQ9JIS7 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1fQ9JIS7 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Cacna1fQ9JIS7 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1fQ9JIS7 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1fQ9JIS7 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1fQ9JIS7 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1fQ9JIS7 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1fQ9JIS7 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1fQ9JIS7 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1fQ9JIS7 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1fQ9JIS7 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1fQ9JIS7 Gm9755-201ENSMUST00000032981 1356 ntBASIC15.82■□□□□ 0.12
Cacna1fQ9JIS7 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Cacna1fQ9JIS7 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1fQ9JIS7 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1fQ9JIS7 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC15.81■□□□□ 0.12
Cacna1fQ9JIS7 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.81■□□□□ 0.12
Cacna1fQ9JIS7 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1fQ9JIS7 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Cacna1fQ9JIS7 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1fQ9JIS7 Gm2639-201ENSMUST00000156881 1297 ntBASIC15.81■□□□□ 0.12
Cacna1fQ9JIS7 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1fQ9JIS7 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC15.81■□□□□ 0.12
Cacna1fQ9JIS7 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC15.81■□□□□ 0.12
Cacna1fQ9JIS7 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1fQ9JIS7 Gm42550-201ENSMUST00000201553 960 ntBASIC15.81■□□□□ 0.12
Cacna1fQ9JIS7 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1fQ9JIS7 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.81■□□□□ 0.12
Cacna1fQ9JIS7 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1fQ9JIS7 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1fQ9JIS7 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1fQ9JIS7 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1fQ9JIS7 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Cacna1fQ9JIS7 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cacna1fQ9JIS7 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cacna1fQ9JIS7 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC15.8■□□□□ 0.12
Cacna1fQ9JIS7 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cacna1fQ9JIS7 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Cacna1fQ9JIS7 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.8■□□□□ 0.12
Cacna1fQ9JIS7 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC15.8■□□□□ 0.12
Cacna1fQ9JIS7 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cacna1fQ9JIS7 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cacna1fQ9JIS7 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cacna1fQ9JIS7 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Cacna1fQ9JIS7 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.8■□□□□ 0.12
Cacna1fQ9JIS7 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cacna1fQ9JIS7 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cacna1fQ9JIS7 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cacna1fQ9JIS7 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC15.8■□□□□ 0.12
Cacna1fQ9JIS7 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC15.8■□□□□ 0.12
Cacna1fQ9JIS7 Gm8801-201ENSMUST00000173255 1064 ntBASIC15.8■□□□□ 0.12
Cacna1fQ9JIS7 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC15.8■□□□□ 0.12
Cacna1fQ9JIS7 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC15.8■□□□□ 0.12
Cacna1fQ9JIS7 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cacna1fQ9JIS7 Snora73a-201ENSMUST00000082453 205 ntBASIC15.8■□□□□ 0.12
Cacna1fQ9JIS7 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cacna1fQ9JIS7 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cacna1fQ9JIS7 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cacna1fQ9JIS7 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
Cacna1fQ9JIS7 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1fQ9JIS7 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1fQ9JIS7 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Cacna1fQ9JIS7 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1fQ9JIS7 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Cacna1fQ9JIS7 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1fQ9JIS7 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1fQ9JIS7 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1fQ9JIS7 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1fQ9JIS7 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.79■□□□□ 0.12
Cacna1fQ9JIS7 Gm6023-201ENSMUST00000118217 606 ntBASIC15.79■□□□□ 0.12
Cacna1fQ9JIS7 Gm11793-201ENSMUST00000120433 981 ntBASIC15.79■□□□□ 0.12
Cacna1fQ9JIS7 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1fQ9JIS7 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1fQ9JIS7 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1fQ9JIS7 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC15.79■□□□□ 0.12
Cacna1fQ9JIS7 Gm7172-201ENSMUST00000218047 1152 ntBASIC15.79■□□□□ 0.12
Cacna1fQ9JIS7 AC140406.1-201ENSMUST00000226481 465 ntBASIC15.79■□□□□ 0.12
Cacna1fQ9JIS7 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1fQ9JIS7 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1fQ9JIS7 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1fQ9JIS7 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1fQ9JIS7 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1fQ9JIS7 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1fQ9JIS7 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.79■□□□□ 0.12
Cacna1fQ9JIS7 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.79■□□□□ 0.12
Cacna1fQ9JIS7 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1fQ9JIS7 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1fQ9JIS7 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1fQ9JIS7 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1fQ9JIS7 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1fQ9JIS7 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms