Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ube3bQ9ES34 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube3bQ9ES34 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ube3bQ9ES34 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Ube3bQ9ES34 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ube3bQ9ES34 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube3bQ9ES34 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3bQ9ES34 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3bQ9ES34 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3bQ9ES34 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3bQ9ES34 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Ube3bQ9ES34 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3bQ9ES34 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3bQ9ES34 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3bQ9ES34 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3bQ9ES34 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3bQ9ES34 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Ube3bQ9ES34 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3bQ9ES34 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC16.75■□□□□ 0.27
Ube3bQ9ES34 Gm24420-201ENSMUST00000176676 59 ntBASIC16.75■□□□□ 0.27
Ube3bQ9ES34 Gm5354-201ENSMUST00000182417 973 ntBASIC16.75■□□□□ 0.27
Ube3bQ9ES34 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.75■□□□□ 0.27
Ube3bQ9ES34 Gm45668-201ENSMUST00000211271 493 ntBASIC16.75■□□□□ 0.27
Ube3bQ9ES34 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3bQ9ES34 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3bQ9ES34 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Ube3bQ9ES34 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3bQ9ES34 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3bQ9ES34 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3bQ9ES34 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3bQ9ES34 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Ube3bQ9ES34 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Ube3bQ9ES34 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3bQ9ES34 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3bQ9ES34 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3bQ9ES34 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3bQ9ES34 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3bQ9ES34 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3bQ9ES34 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Ube3bQ9ES34 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3bQ9ES34 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3bQ9ES34 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube3bQ9ES34 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube3bQ9ES34 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube3bQ9ES34 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ube3bQ9ES34 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube3bQ9ES34 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ube3bQ9ES34 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ube3bQ9ES34 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube3bQ9ES34 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube3bQ9ES34 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ube3bQ9ES34 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube3bQ9ES34 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube3bQ9ES34 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Ube3bQ9ES34 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube3bQ9ES34 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube3bQ9ES34 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Ube3bQ9ES34 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC16.74■□□□□ 0.27
Ube3bQ9ES34 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC16.74■□□□□ 0.27
Ube3bQ9ES34 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC16.74■□□□□ 0.27
Ube3bQ9ES34 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ube3bQ9ES34 Gm3809-201ENSMUST00000180973 1006 ntBASIC16.74■□□□□ 0.27
Ube3bQ9ES34 Gm37917-201ENSMUST00000194711 392 ntBASIC16.74■□□□□ 0.27
Ube3bQ9ES34 Gm45691-201ENSMUST00000206905 1120 ntBASIC16.74■□□□□ 0.27
Ube3bQ9ES34 Gm19220-201ENSMUST00000222682 803 ntBASIC16.74■□□□□ 0.27
Ube3bQ9ES34 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube3bQ9ES34 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube3bQ9ES34 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC16.74■□□□□ 0.27
Ube3bQ9ES34 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Ube3bQ9ES34 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube3bQ9ES34 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube3bQ9ES34 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube3bQ9ES34 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube3bQ9ES34 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ube3bQ9ES34 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube3bQ9ES34 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube3bQ9ES34 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ube3bQ9ES34 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube3bQ9ES34 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Ube3bQ9ES34 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube3bQ9ES34 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube3bQ9ES34 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube3bQ9ES34 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube3bQ9ES34 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube3bQ9ES34 Gm14928-201ENSMUST00000120198 477 ntBASIC16.73■□□□□ 0.27
Ube3bQ9ES34 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ube3bQ9ES34 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ube3bQ9ES34 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC16.73■□□□□ 0.27
Ube3bQ9ES34 Gm18624-201ENSMUST00000220966 658 ntBASIC16.73■□□□□ 0.27
Ube3bQ9ES34 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube3bQ9ES34 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube3bQ9ES34 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube3bQ9ES34 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
Ube3bQ9ES34 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube3bQ9ES34 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Ube3bQ9ES34 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Ube3bQ9ES34 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ube3bQ9ES34 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube3bQ9ES34 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube3bQ9ES34 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms