Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hmgn3Q9DCB1 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hmgn3Q9DCB1 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Hmgn3Q9DCB1 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hmgn3Q9DCB1 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Hmgn3Q9DCB1 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hmgn3Q9DCB1 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hmgn3Q9DCB1 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hmgn3Q9DCB1 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Hmgn3Q9DCB1 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Hmgn3Q9DCB1 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Hmgn3Q9DCB1 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
Hmgn3Q9DCB1 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgn3Q9DCB1 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgn3Q9DCB1 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgn3Q9DCB1 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgn3Q9DCB1 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgn3Q9DCB1 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgn3Q9DCB1 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.27□□□□□ -0.29
Hmgn3Q9DCB1 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgn3Q9DCB1 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.27□□□□□ -0.29
Hmgn3Q9DCB1 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgn3Q9DCB1 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgn3Q9DCB1 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgn3Q9DCB1 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.27□□□□□ -0.29
Hmgn3Q9DCB1 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Hmgn3Q9DCB1 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgn3Q9DCB1 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Hmgn3Q9DCB1 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgn3Q9DCB1 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgn3Q9DCB1 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgn3Q9DCB1 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgn3Q9DCB1 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgn3Q9DCB1 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgn3Q9DCB1 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgn3Q9DCB1 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgn3Q9DCB1 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgn3Q9DCB1 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgn3Q9DCB1 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgn3Q9DCB1 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmgn3Q9DCB1 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmgn3Q9DCB1 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Hmgn3Q9DCB1 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmgn3Q9DCB1 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Hmgn3Q9DCB1 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmgn3Q9DCB1 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Hmgn3Q9DCB1 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmgn3Q9DCB1 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmgn3Q9DCB1 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmgn3Q9DCB1 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Hmgn3Q9DCB1 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.26□□□□□ -0.29
Hmgn3Q9DCB1 Gm12644-201ENSMUST00000119935 606 ntBASIC13.26□□□□□ -0.29
Hmgn3Q9DCB1 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmgn3Q9DCB1 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmgn3Q9DCB1 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Hmgn3Q9DCB1 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmgn3Q9DCB1 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.26□□□□□ -0.29
Hmgn3Q9DCB1 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmgn3Q9DCB1 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmgn3Q9DCB1 Gm7977-201ENSMUST00000193787 748 ntBASIC13.26□□□□□ -0.29
Hmgn3Q9DCB1 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmgn3Q9DCB1 Gm9182-201ENSMUST00000217829 639 ntBASIC13.26□□□□□ -0.29
Hmgn3Q9DCB1 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.26□□□□□ -0.29
Hmgn3Q9DCB1 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmgn3Q9DCB1 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmgn3Q9DCB1 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmgn3Q9DCB1 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
Hmgn3Q9DCB1 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmgn3Q9DCB1 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmgn3Q9DCB1 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Hmgn3Q9DCB1 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmgn3Q9DCB1 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmgn3Q9DCB1 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Hmgn3Q9DCB1 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmgn3Q9DCB1 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hmgn3Q9DCB1 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.25□□□□□ -0.29
Hmgn3Q9DCB1 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms