Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Stag1Q9D3E6 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stag1Q9D3E6 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Stag1Q9D3E6 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stag1Q9D3E6 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Stag1Q9D3E6 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stag1Q9D3E6 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stag1Q9D3E6 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stag1Q9D3E6 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stag1Q9D3E6 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stag1Q9D3E6 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Stag1Q9D3E6 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Stag1Q9D3E6 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Stag1Q9D3E6 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Stag1Q9D3E6 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Stag1Q9D3E6 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Stag1Q9D3E6 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Stag1Q9D3E6 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.78■□□□□ 0.28
Stag1Q9D3E6 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC16.78■□□□□ 0.28
Stag1Q9D3E6 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC16.78■□□□□ 0.28
Stag1Q9D3E6 Gm18905-201ENSMUST00000205454 928 ntBASIC16.78■□□□□ 0.28
Stag1Q9D3E6 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Stag1Q9D3E6 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Stag1Q9D3E6 AC155252.1-201ENSMUST00000226462 1208 ntBASIC16.78■□□□□ 0.28
Stag1Q9D3E6 AC150560.1-201ENSMUST00000227731 1187 ntBASIC16.78■□□□□ 0.28
Stag1Q9D3E6 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Stag1Q9D3E6 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Stag1Q9D3E6 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Stag1Q9D3E6 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.78■□□□□ 0.28
Stag1Q9D3E6 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Stag1Q9D3E6 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.78■□□□□ 0.28
Stag1Q9D3E6 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Stag1Q9D3E6 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Stag1Q9D3E6 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Stag1Q9D3E6 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Stag1Q9D3E6 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Stag1Q9D3E6 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Stag1Q9D3E6 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Stag1Q9D3E6 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Stag1Q9D3E6 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Stag1Q9D3E6 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Stag1Q9D3E6 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Stag1Q9D3E6 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Stag1Q9D3E6 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Stag1Q9D3E6 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Stag1Q9D3E6 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Stag1Q9D3E6 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC16.77■□□□□ 0.28
Stag1Q9D3E6 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC16.77■□□□□ 0.28
Stag1Q9D3E6 Gm13829-201ENSMUST00000119600 138 ntBASIC16.77■□□□□ 0.28
Stag1Q9D3E6 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Stag1Q9D3E6 AC155258.1-201ENSMUST00000219303 253 ntBASIC16.77■□□□□ 0.28
Stag1Q9D3E6 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Stag1Q9D3E6 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Stag1Q9D3E6 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Stag1Q9D3E6 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC16.77■□□□□ 0.27
Stag1Q9D3E6 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Stag1Q9D3E6 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
Stag1Q9D3E6 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Stag1Q9D3E6 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Stag1Q9D3E6 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.77■□□□□ 0.27
Stag1Q9D3E6 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Stag1Q9D3E6 Gm8131-201ENSMUST00000213783 1570 ntBASIC16.77■□□□□ 0.27
Stag1Q9D3E6 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Stag1Q9D3E6 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Stag1Q9D3E6 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Stag1Q9D3E6 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Stag1Q9D3E6 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Stag1Q9D3E6 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Stag1Q9D3E6 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Stag1Q9D3E6 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Stag1Q9D3E6 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Stag1Q9D3E6 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.76■□□□□ 0.27
Stag1Q9D3E6 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Stag1Q9D3E6 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Stag1Q9D3E6 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.76■□□□□ 0.27
Stag1Q9D3E6 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC16.76■□□□□ 0.27
Stag1Q9D3E6 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Stag1Q9D3E6 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC16.76■□□□□ 0.27
Stag1Q9D3E6 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Stag1Q9D3E6 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Stag1Q9D3E6 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC16.76■□□□□ 0.27
Stag1Q9D3E6 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC16.76■□□□□ 0.27
Stag1Q9D3E6 Gm5035-201ENSMUST00000215581 927 ntBASIC16.76■□□□□ 0.27
Stag1Q9D3E6 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Stag1Q9D3E6 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Stag1Q9D3E6 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Stag1Q9D3E6 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Stag1Q9D3E6 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Stag1Q9D3E6 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Stag1Q9D3E6 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.76■□□□□ 0.27
Stag1Q9D3E6 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Stag1Q9D3E6 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Stag1Q9D3E6 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC16.76■□□□□ 0.27
Stag1Q9D3E6 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Stag1Q9D3E6 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.76■□□□□ 0.27
Stag1Q9D3E6 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Stag1Q9D3E6 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Stag1Q9D3E6 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Stag1Q9D3E6 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC16.75■□□□□ 0.27
Stag1Q9D3E6 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms