Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Upk1aQ9D132 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk1aQ9D132 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk1aQ9D132 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Upk1aQ9D132 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Upk1aQ9D132 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk1aQ9D132 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk1aQ9D132 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Upk1aQ9D132 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk1aQ9D132 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk1aQ9D132 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Upk1aQ9D132 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk1aQ9D132 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk1aQ9D132 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Upk1aQ9D132 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1aQ9D132 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1aQ9D132 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1aQ9D132 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1aQ9D132 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1aQ9D132 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1aQ9D132 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1aQ9D132 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1aQ9D132 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1aQ9D132 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1aQ9D132 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Upk1aQ9D132 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1aQ9D132 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Upk1aQ9D132 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1aQ9D132 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.38□□□□□ -0.27
Upk1aQ9D132 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.38□□□□□ -0.27
Upk1aQ9D132 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1aQ9D132 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Upk1aQ9D132 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Upk1aQ9D132 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.38□□□□□ -0.27
Upk1aQ9D132 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.38□□□□□ -0.27
Upk1aQ9D132 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1aQ9D132 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1aQ9D132 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1aQ9D132 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1aQ9D132 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Upk1aQ9D132 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1aQ9D132 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1aQ9D132 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Upk1aQ9D132 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1aQ9D132 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.38□□□□□ -0.27
Upk1aQ9D132 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1aQ9D132 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1aQ9D132 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Upk1aQ9D132 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1aQ9D132 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1aQ9D132 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1aQ9D132 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1aQ9D132 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.37□□□□□ -0.27
Upk1aQ9D132 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1aQ9D132 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1aQ9D132 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.37□□□□□ -0.27
Upk1aQ9D132 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1aQ9D132 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.37□□□□□ -0.27
Upk1aQ9D132 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1aQ9D132 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Upk1aQ9D132 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1aQ9D132 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Upk1aQ9D132 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1aQ9D132 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1aQ9D132 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1aQ9D132 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1aQ9D132 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1aQ9D132 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.37□□□□□ -0.27
Upk1aQ9D132 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.37□□□□□ -0.27
Upk1aQ9D132 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.37□□□□□ -0.27
Upk1aQ9D132 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1aQ9D132 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1aQ9D132 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1aQ9D132 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1aQ9D132 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1aQ9D132 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1aQ9D132 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Upk1aQ9D132 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1aQ9D132 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1aQ9D132 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Upk1aQ9D132 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1aQ9D132 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1aQ9D132 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1aQ9D132 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk1aQ9D132 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk1aQ9D132 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.36□□□□□ -0.27
Upk1aQ9D132 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Upk1aQ9D132 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk1aQ9D132 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk1aQ9D132 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk1aQ9D132 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Upk1aQ9D132 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.36□□□□□ -0.27
Upk1aQ9D132 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.36□□□□□ -0.27
Upk1aQ9D132 Gm15483-201ENSMUST00000120338 456 ntBASIC13.36□□□□□ -0.27
Upk1aQ9D132 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk1aQ9D132 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.36□□□□□ -0.27
Upk1aQ9D132 Gm5177-201ENSMUST00000183092 997 ntBASIC13.36□□□□□ -0.27
Upk1aQ9D132 Gm2651-201ENSMUST00000203560 838 ntBASIC13.36□□□□□ -0.27
Upk1aQ9D132 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.36□□□□□ -0.27
Upk1aQ9D132 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms