Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssu72Q9CY97 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.03□□□□□ -0.16
Ssu72Q9CY97 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssu72Q9CY97 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.03□□□□□ -0.16
Ssu72Q9CY97 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.03□□□□□ -0.16
Ssu72Q9CY97 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssu72Q9CY97 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssu72Q9CY97 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.03□□□□□ -0.16
Ssu72Q9CY97 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.03□□□□□ -0.16
Ssu72Q9CY97 Gm15483-201ENSMUST00000120338 456 ntBASIC14.03□□□□□ -0.16
Ssu72Q9CY97 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ssu72Q9CY97 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ssu72Q9CY97 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssu72Q9CY97 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ssu72Q9CY97 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssu72Q9CY97 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssu72Q9CY97 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssu72Q9CY97 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssu72Q9CY97 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ssu72Q9CY97 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ssu72Q9CY97 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssu72Q9CY97 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ssu72Q9CY97 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssu72Q9CY97 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssu72Q9CY97 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ssu72Q9CY97 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssu72Q9CY97 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
Ssu72Q9CY97 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssu72Q9CY97 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssu72Q9CY97 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
Ssu72Q9CY97 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssu72Q9CY97 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ssu72Q9CY97 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.02□□□□□ -0.16
Ssu72Q9CY97 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ssu72Q9CY97 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Ssu72Q9CY97 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Ssu72Q9CY97 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssu72Q9CY97 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Ssu72Q9CY97 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ssu72Q9CY97 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssu72Q9CY97 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssu72Q9CY97 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssu72Q9CY97 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Ssu72Q9CY97 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.02□□□□□ -0.16
Ssu72Q9CY97 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ssu72Q9CY97 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.02□□□□□ -0.17
Ssu72Q9CY97 Gm7977-201ENSMUST00000193787 748 ntBASIC14.02□□□□□ -0.17
Ssu72Q9CY97 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.02□□□□□ -0.17
Ssu72Q9CY97 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.02□□□□□ -0.17
Ssu72Q9CY97 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssu72Q9CY97 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssu72Q9CY97 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ssu72Q9CY97 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssu72Q9CY97 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssu72Q9CY97 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssu72Q9CY97 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssu72Q9CY97 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ssu72Q9CY97 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ssu72Q9CY97 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ssu72Q9CY97 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssu72Q9CY97 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssu72Q9CY97 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ssu72Q9CY97 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssu72Q9CY97 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Ssu72Q9CY97 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssu72Q9CY97 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ssu72Q9CY97 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Ssu72Q9CY97 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssu72Q9CY97 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssu72Q9CY97 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssu72Q9CY97 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Ssu72Q9CY97 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssu72Q9CY97 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ssu72Q9CY97 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssu72Q9CY97 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ssu72Q9CY97 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.01□□□□□ -0.17
Ssu72Q9CY97 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Ssu72Q9CY97 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ssu72Q9CY97 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Ssu72Q9CY97 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.01□□□□□ -0.17
Ssu72Q9CY97 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssu72Q9CY97 Gm15957-201ENSMUST00000118893 974 ntBASIC14.01□□□□□ -0.17
Ssu72Q9CY97 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.01□□□□□ -0.17
Ssu72Q9CY97 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ssu72Q9CY97 Gm27920-201ENSMUST00000183953 96 ntBASIC14.01□□□□□ -0.17
Ssu72Q9CY97 Gm27628-201ENSMUST00000184911 107 ntBASIC14.01□□□□□ -0.17
Ssu72Q9CY97 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssu72Q9CY97 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ssu72Q9CY97 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssu72Q9CY97 Gm7461-201ENSMUST00000058918 827 ntBASIC14.01□□□□□ -0.17
Ssu72Q9CY97 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssu72Q9CY97 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.01□□□□□ -0.17
Ssu72Q9CY97 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssu72Q9CY97 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.01□□□□□ -0.17
Ssu72Q9CY97 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssu72Q9CY97 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ssu72Q9CY97 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssu72Q9CY97 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssu72Q9CY97 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssu72Q9CY97 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms