Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.84■□□□□ 0.13
Smc1aQ9CU62 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.84■□□□□ 0.13
Smc1aQ9CU62 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smc1aQ9CU62 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Smc1aQ9CU62 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smc1aQ9CU62 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smc1aQ9CU62 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.84■□□□□ 0.13
Smc1aQ9CU62 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Smc1aQ9CU62 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Smc1aQ9CU62 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC15.84■□□□□ 0.13
Smc1aQ9CU62 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
Smc1aQ9CU62 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smc1aQ9CU62 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smc1aQ9CU62 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Smc1aQ9CU62 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
Smc1aQ9CU62 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Smc1aQ9CU62 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Smc1aQ9CU62 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc1aQ9CU62 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Smc1aQ9CU62 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc1aQ9CU62 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc1aQ9CU62 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc1aQ9CU62 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Smc1aQ9CU62 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.83■□□□□ 0.12
Smc1aQ9CU62 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC15.83■□□□□ 0.12
Smc1aQ9CU62 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.83■□□□□ 0.12
Smc1aQ9CU62 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Smc1aQ9CU62 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC15.83■□□□□ 0.12
Smc1aQ9CU62 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.83■□□□□ 0.12
Smc1aQ9CU62 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Smc1aQ9CU62 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.83■□□□□ 0.12
Smc1aQ9CU62 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc1aQ9CU62 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc1aQ9CU62 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.83■□□□□ 0.12
Smc1aQ9CU62 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.83■□□□□ 0.12
Smc1aQ9CU62 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Smc1aQ9CU62 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Smc1aQ9CU62 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc1aQ9CU62 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc1aQ9CU62 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc1aQ9CU62 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.83■□□□□ 0.12
Smc1aQ9CU62 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc1aQ9CU62 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Smc1aQ9CU62 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc1aQ9CU62 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc1aQ9CU62 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.82■□□□□ 0.12
Smc1aQ9CU62 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc1aQ9CU62 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc1aQ9CU62 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smc1aQ9CU62 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Smc1aQ9CU62 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc1aQ9CU62 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc1aQ9CU62 Gm43570-201ENSMUST00000199951 3688 ntBASIC15.82■□□□□ 0.12
Smc1aQ9CU62 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Smc1aQ9CU62 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Smc1aQ9CU62 Gm13223-201ENSMUST00000118609 747 ntBASIC15.82■□□□□ 0.12
Smc1aQ9CU62 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.82■□□□□ 0.12
Smc1aQ9CU62 Gm5866-201ENSMUST00000177881 973 ntBASIC15.82■□□□□ 0.12
Smc1aQ9CU62 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smc1aQ9CU62 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.82■□□□□ 0.12
Smc1aQ9CU62 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc1aQ9CU62 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc1aQ9CU62 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc1aQ9CU62 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc1aQ9CU62 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc1aQ9CU62 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc1aQ9CU62 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smc1aQ9CU62 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc1aQ9CU62 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc1aQ9CU62 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc1aQ9CU62 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Smc1aQ9CU62 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc1aQ9CU62 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc1aQ9CU62 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc1aQ9CU62 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc1aQ9CU62 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc1aQ9CU62 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc1aQ9CU62 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smc1aQ9CU62 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.81■□□□□ 0.12
Smc1aQ9CU62 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Smc1aQ9CU62 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.81■□□□□ 0.12
Smc1aQ9CU62 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smc1aQ9CU62 Gm12151-201ENSMUST00000121374 290 ntBASIC15.81■□□□□ 0.12
Smc1aQ9CU62 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Smc1aQ9CU62 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc1aQ9CU62 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.81■□□□□ 0.12
Smc1aQ9CU62 Gm27618-201ENSMUST00000183671 60 ntBASIC15.81■□□□□ 0.12
Smc1aQ9CU62 Gm5745-201ENSMUST00000183748 313 ntBASIC15.81■□□□□ 0.12
Smc1aQ9CU62 Gm17837-201ENSMUST00000186435 985 ntBASIC15.81■□□□□ 0.12
Smc1aQ9CU62 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.81■□□□□ 0.12
Smc1aQ9CU62 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc1aQ9CU62 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.81■□□□□ 0.12
Smc1aQ9CU62 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc1aQ9CU62 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Smc1aQ9CU62 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Smc1aQ9CU62 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc1aQ9CU62 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Smc1aQ9CU62 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc1aQ9CU62 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc1aQ9CU62 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms