Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm37411-201ENSMUST00000194180 2282 ntBASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
RTRAFQ9CQE8 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
RTRAFQ9CQE8 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RTRAFQ9CQE8 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
RTRAFQ9CQE8 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RTRAFQ9CQE8 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
RTRAFQ9CQE8 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
RTRAFQ9CQE8 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
RTRAFQ9CQE8 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RTRAFQ9CQE8 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
RTRAFQ9CQE8 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
RTRAFQ9CQE8 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
RTRAFQ9CQE8 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
RTRAFQ9CQE8 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
RTRAFQ9CQE8 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
RTRAFQ9CQE8 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RTRAFQ9CQE8 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC11.48□□□□□ -0.57
RTRAFQ9CQE8 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RTRAFQ9CQE8 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC11.48□□□□□ -0.57
RTRAFQ9CQE8 AC164567.1-201ENSMUST00000219185 960 ntBASIC11.48□□□□□ -0.57
RTRAFQ9CQE8 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
RTRAFQ9CQE8 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.48□□□□□ -0.57
RTRAFQ9CQE8 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RTRAFQ9CQE8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RTRAFQ9CQE8 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
RTRAFQ9CQE8 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RTRAFQ9CQE8 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
RTRAFQ9CQE8 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RTRAFQ9CQE8 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RTRAFQ9CQE8 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RTRAFQ9CQE8 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RTRAFQ9CQE8 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
RTRAFQ9CQE8 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RTRAFQ9CQE8 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RTRAFQ9CQE8 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RTRAFQ9CQE8 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RTRAFQ9CQE8 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RTRAFQ9CQE8 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RTRAFQ9CQE8 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.48□□□□□ -0.57
RTRAFQ9CQE8 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
RTRAFQ9CQE8 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 Gm8258-201ENSMUST00000055593 1449 ntBASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 Gm8584-201ENSMUST00000171982 758 ntBASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RTRAFQ9CQE8 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms