Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Krt88Q9CPR6 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Krt88Q9CPR6 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Krt88Q9CPR6 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Krt88Q9CPR6 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Krt88Q9CPR6 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Krt88Q9CPR6 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Krt88Q9CPR6 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Krt88Q9CPR6 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Krt88Q9CPR6 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Krt88Q9CPR6 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Krt88Q9CPR6 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Krt88Q9CPR6 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.75□□□□□ -0.37
Krt88Q9CPR6 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Krt88Q9CPR6 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Krt88Q9CPR6 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Krt88Q9CPR6 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Krt88Q9CPR6 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Krt88Q9CPR6 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.75□□□□□ -0.37
Krt88Q9CPR6 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Krt88Q9CPR6 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Krt88Q9CPR6 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Krt88Q9CPR6 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.75□□□□□ -0.37
Krt88Q9CPR6 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Krt88Q9CPR6 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.75□□□□□ -0.37
Krt88Q9CPR6 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Krt88Q9CPR6 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Krt88Q9CPR6 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Krt88Q9CPR6 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Krt88Q9CPR6 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Krt88Q9CPR6 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Krt88Q9CPR6 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Krt88Q9CPR6 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Krt88Q9CPR6 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Krt88Q9CPR6 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Krt88Q9CPR6 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Krt88Q9CPR6 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Gm4899-201ENSMUST00000178708 719 ntBASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Gm2272-201ENSMUST00000194903 582 ntBASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Gm34391-201ENSMUST00000203706 907 ntBASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.74□□□□□ -0.37
Krt88Q9CPR6 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.73□□□□□ -0.37
Krt88Q9CPR6 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Krt88Q9CPR6 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt88Q9CPR6 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt88Q9CPR6 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Krt88Q9CPR6 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt88Q9CPR6 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt88Q9CPR6 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Krt88Q9CPR6 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt88Q9CPR6 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Krt88Q9CPR6 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt88Q9CPR6 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Krt88Q9CPR6 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.73□□□□□ -0.37
Krt88Q9CPR6 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.73□□□□□ -0.37
Krt88Q9CPR6 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms