Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Trim34aQ99PP6 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trim34aQ99PP6 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim34aQ99PP6 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim34aQ99PP6 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Trim34aQ99PP6 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim34aQ99PP6 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim34aQ99PP6 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim34aQ99PP6 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim34aQ99PP6 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim34aQ99PP6 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC17.36■□□□□ 0.37
Trim34aQ99PP6 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trim34aQ99PP6 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim34aQ99PP6 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim34aQ99PP6 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim34aQ99PP6 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim34aQ99PP6 Gm12416-201ENSMUST00000120911 1008 ntBASIC17.36■□□□□ 0.37
Trim34aQ99PP6 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC17.36■□□□□ 0.37
Trim34aQ99PP6 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC17.36■□□□□ 0.37
Trim34aQ99PP6 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC17.36■□□□□ 0.37
Trim34aQ99PP6 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC17.36■□□□□ 0.37
Trim34aQ99PP6 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Trim34aQ99PP6 Gm8463-201ENSMUST00000208573 613 ntBASIC17.36■□□□□ 0.37
Trim34aQ99PP6 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC17.36■□□□□ 0.37
Trim34aQ99PP6 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim34aQ99PP6 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim34aQ99PP6 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim34aQ99PP6 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC17.36■□□□□ 0.37
Trim34aQ99PP6 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim34aQ99PP6 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trim34aQ99PP6 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim34aQ99PP6 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trim34aQ99PP6 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim34aQ99PP6 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim34aQ99PP6 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trim34aQ99PP6 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim34aQ99PP6 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim34aQ99PP6 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Trim34aQ99PP6 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim34aQ99PP6 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim34aQ99PP6 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Trim34aQ99PP6 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC17.35■□□□□ 0.37
Trim34aQ99PP6 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim34aQ99PP6 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim34aQ99PP6 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim34aQ99PP6 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim34aQ99PP6 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim34aQ99PP6 Mup-ps23-201ENSMUST00000118063 630 ntBASIC17.35■□□□□ 0.37
Trim34aQ99PP6 Gm15376-201ENSMUST00000122258 783 ntBASIC17.35■□□□□ 0.37
Trim34aQ99PP6 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim34aQ99PP6 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim34aQ99PP6 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim34aQ99PP6 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trim34aQ99PP6 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim34aQ99PP6 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC17.35■□□□□ 0.37
Trim34aQ99PP6 AC166349.1-201ENSMUST00000220866 695 ntBASIC17.35■□□□□ 0.37
Trim34aQ99PP6 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim34aQ99PP6 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim34aQ99PP6 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim34aQ99PP6 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim34aQ99PP6 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim34aQ99PP6 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Trim34aQ99PP6 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Trim34aQ99PP6 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim34aQ99PP6 Ssr1-204ENSMUST00000225319 1610 ntBASIC17.35■□□□□ 0.37
Trim34aQ99PP6 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Trim34aQ99PP6 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim34aQ99PP6 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.35■□□□□ 0.37
Trim34aQ99PP6 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim34aQ99PP6 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim34aQ99PP6 Gm42471-201ENSMUST00000201457 1865 ntBASIC17.35■□□□□ 0.37
Trim34aQ99PP6 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim34aQ99PP6 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC17.35■□□□□ 0.37
Trim34aQ99PP6 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Trim34aQ99PP6 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim34aQ99PP6 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim34aQ99PP6 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim34aQ99PP6 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim34aQ99PP6 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim34aQ99PP6 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim34aQ99PP6 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim34aQ99PP6 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Trim34aQ99PP6 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim34aQ99PP6 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim34aQ99PP6 Gm12928-201ENSMUST00000117115 573 ntBASIC17.34■□□□□ 0.37
Trim34aQ99PP6 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim34aQ99PP6 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC17.34■□□□□ 0.37
Trim34aQ99PP6 Gm26464-201ENSMUST00000157094 305 ntBASIC17.34■□□□□ 0.37
Trim34aQ99PP6 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim34aQ99PP6 Gm8835-201ENSMUST00000173096 1169 ntBASIC17.34■□□□□ 0.37
Trim34aQ99PP6 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim34aQ99PP6 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim34aQ99PP6 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trim34aQ99PP6 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trim34aQ99PP6 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim34aQ99PP6 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim34aQ99PP6 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim34aQ99PP6 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim34aQ99PP6 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim34aQ99PP6 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 94.6 ms