Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh15Q99PJ1 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Pcdh15Q99PJ1 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh15Q99PJ1 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh15Q99PJ1 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh15Q99PJ1 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh15Q99PJ1 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
Pcdh15Q99PJ1 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh15Q99PJ1 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Pcdh15Q99PJ1 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh15Q99PJ1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh15Q99PJ1 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh15Q99PJ1 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh15Q99PJ1 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh15Q99PJ1 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh15Q99PJ1 Mospd4-201ENSMUST00000180618 576 ntBASIC15.63■□□□□ 0.09
Pcdh15Q99PJ1 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC15.63■□□□□ 0.09
Pcdh15Q99PJ1 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh15Q99PJ1 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh15Q99PJ1 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh15Q99PJ1 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh15Q99PJ1 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh15Q99PJ1 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh15Q99PJ1 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh15Q99PJ1 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh15Q99PJ1 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh15Q99PJ1 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.63■□□□□ 0.09
Pcdh15Q99PJ1 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh15Q99PJ1 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh15Q99PJ1 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.63■□□□□ 0.09
Pcdh15Q99PJ1 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh15Q99PJ1 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh15Q99PJ1 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh15Q99PJ1 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh15Q99PJ1 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh15Q99PJ1 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh15Q99PJ1 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC15.62■□□□□ 0.09
Pcdh15Q99PJ1 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh15Q99PJ1 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC15.62■□□□□ 0.09
Pcdh15Q99PJ1 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh15Q99PJ1 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh15Q99PJ1 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh15Q99PJ1 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh15Q99PJ1 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Pcdh15Q99PJ1 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh15Q99PJ1 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh15Q99PJ1 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh15Q99PJ1 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh15Q99PJ1 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC15.62■□□□□ 0.09
Pcdh15Q99PJ1 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC15.62■□□□□ 0.09
Pcdh15Q99PJ1 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Pcdh15Q99PJ1 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC15.62■□□□□ 0.09
Pcdh15Q99PJ1 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC15.62■□□□□ 0.09
Pcdh15Q99PJ1 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh15Q99PJ1 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh15Q99PJ1 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh15Q99PJ1 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh15Q99PJ1 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh15Q99PJ1 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh15Q99PJ1 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh15Q99PJ1 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Pcdh15Q99PJ1 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh15Q99PJ1 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh15Q99PJ1 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh15Q99PJ1 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh15Q99PJ1 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh15Q99PJ1 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh15Q99PJ1 Gm37986-201ENSMUST00000193285 383 ntBASIC15.61■□□□□ 0.09
Pcdh15Q99PJ1 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdh15Q99PJ1 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh15Q99PJ1 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh15Q99PJ1 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh15Q99PJ1 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdh15Q99PJ1 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh15Q99PJ1 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC15.61■□□□□ 0.09
Pcdh15Q99PJ1 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh15Q99PJ1 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh15Q99PJ1 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh15Q99PJ1 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Pcdh15Q99PJ1 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh15Q99PJ1 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh15Q99PJ1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Pcdh15Q99PJ1 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Pcdh15Q99PJ1 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh15Q99PJ1 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh15Q99PJ1 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh15Q99PJ1 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh15Q99PJ1 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.6■□□□□ 0.09
Pcdh15Q99PJ1 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh15Q99PJ1 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Pcdh15Q99PJ1 Gm14208-201ENSMUST00000119645 678 ntBASIC15.6■□□□□ 0.09
Pcdh15Q99PJ1 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC15.6■□□□□ 0.09
Pcdh15Q99PJ1 Gm38317-201ENSMUST00000195564 343 ntBASIC15.6■□□□□ 0.09
Pcdh15Q99PJ1 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC15.6■□□□□ 0.09
Pcdh15Q99PJ1 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh15Q99PJ1 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh15Q99PJ1 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh15Q99PJ1 Gm37411-201ENSMUST00000194180 2282 ntBASIC15.6■□□□□ 0.09
Pcdh15Q99PJ1 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh15Q99PJ1 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms