Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn4Q99P72 CT025535.1-201ENSMUST00000227172 491 ntBASIC18.28■□□□□ 0.52
Rtn4Q99P72 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn4Q99P72 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn4Q99P72 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn4Q99P72 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn4Q99P72 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn4Q99P72 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn4Q99P72 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn4Q99P72 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn4Q99P72 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn4Q99P72 Ap5m1-205ENSMUST00000227431 3757 ntBASIC18.28■□□□□ 0.52
Rtn4Q99P72 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rtn4Q99P72 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Rtn4Q99P72 Gm42934-201ENSMUST00000196920 1345 ntBASIC18.27■□□□□ 0.52
Rtn4Q99P72 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Rtn4Q99P72 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rtn4Q99P72 AC158355.1-201ENSMUST00000215895 1705 ntBASIC18.27■□□□□ 0.52
Rtn4Q99P72 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Rtn4Q99P72 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rtn4Q99P72 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rtn4Q99P72 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC18.27■□□□□ 0.52
Rtn4Q99P72 Gm14603-201ENSMUST00000121275 448 ntBASIC18.27■□□□□ 0.52
Rtn4Q99P72 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Rtn4Q99P72 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rtn4Q99P72 Gm22764-201ENSMUST00000158370 92 ntBASIC18.27■□□□□ 0.52
Rtn4Q99P72 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Rtn4Q99P72 Gm28195-201ENSMUST00000186992 372 ntBASIC18.27■□□□□ 0.52
Rtn4Q99P72 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rtn4Q99P72 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC18.27■□□□□ 0.52
Rtn4Q99P72 AC154730.1-201ENSMUST00000227874 816 ntBASIC18.27■□□□□ 0.52
Rtn4Q99P72 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rtn4Q99P72 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rtn4Q99P72 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rtn4Q99P72 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rtn4Q99P72 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rtn4Q99P72 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC18.27■□□□□ 0.52
Rtn4Q99P72 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rtn4Q99P72 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rtn4Q99P72 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rtn4Q99P72 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Rtn4Q99P72 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Rtn4Q99P72 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rtn4Q99P72 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn4Q99P72 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn4Q99P72 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn4Q99P72 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn4Q99P72 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn4Q99P72 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC18.26■□□□□ 0.51
Rtn4Q99P72 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn4Q99P72 Gm6461-201ENSMUST00000120015 633 ntBASIC18.26■□□□□ 0.51
Rtn4Q99P72 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn4Q99P72 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC18.26■□□□□ 0.51
Rtn4Q99P72 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn4Q99P72 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC18.26■□□□□ 0.51
Rtn4Q99P72 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn4Q99P72 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC18.26■□□□□ 0.51
Rtn4Q99P72 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn4Q99P72 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC18.26■□□□□ 0.51
Rtn4Q99P72 Gm6888-201ENSMUST00000221983 706 ntBASIC18.26■□□□□ 0.51
Rtn4Q99P72 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC18.26■□□□□ 0.51
Rtn4Q99P72 Wdyhv1-206ENSMUST00000227142 786 ntBASIC18.26■□□□□ 0.51
Rtn4Q99P72 Rbfox2-208ENSMUST00000227930 1218 ntBASIC18.26■□□□□ 0.51
Rtn4Q99P72 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn4Q99P72 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn4Q99P72 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn4Q99P72 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Rtn4Q99P72 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn4Q99P72 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Rtn4Q99P72 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn4Q99P72 Ntrk2-209ENSMUST00000225950 2640 ntBASIC18.26■□□□□ 0.51
Rtn4Q99P72 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Rtn4Q99P72 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn4Q99P72 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn4Q99P72 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn4Q99P72 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn4Q99P72 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Rtn4Q99P72 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn4Q99P72 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rtn4Q99P72 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Rtn4Q99P72 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC18.25■□□□□ 0.51
Rtn4Q99P72 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rtn4Q99P72 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rtn4Q99P72 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rtn4Q99P72 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rtn4Q99P72 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rtn4Q99P72 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rtn4Q99P72 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
Rtn4Q99P72 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rtn4Q99P72 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rtn4Q99P72 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC18.25■□□□□ 0.51
Rtn4Q99P72 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rtn4Q99P72 Gm13015-201ENSMUST00000118674 204 ntBASIC18.25■□□□□ 0.51
Rtn4Q99P72 Gm12428-201ENSMUST00000119844 727 ntBASIC18.25■□□□□ 0.51
Rtn4Q99P72 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rtn4Q99P72 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC18.25■□□□□ 0.51
Rtn4Q99P72 Gm8581-201ENSMUST00000188636 890 ntBASIC18.25■□□□□ 0.51
Rtn4Q99P72 Gm18049-201ENSMUST00000208909 581 ntBASIC18.25■□□□□ 0.51
Rtn4Q99P72 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC18.25■□□□□ 0.51
Rtn4Q99P72 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms