Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col25a1Q99MQ5 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col25a1Q99MQ5 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Col25a1Q99MQ5 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.6□□□□□ -0.07
Col25a1Q99MQ5 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col25a1Q99MQ5 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Col25a1Q99MQ5 Gm15393-201ENSMUST00000120499 219 ntBASIC14.6□□□□□ -0.07
Col25a1Q99MQ5 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.6□□□□□ -0.07
Col25a1Q99MQ5 Gm5479-201ENSMUST00000160578 435 ntBASIC14.6□□□□□ -0.07
Col25a1Q99MQ5 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col25a1Q99MQ5 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col25a1Q99MQ5 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Col25a1Q99MQ5 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col25a1Q99MQ5 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col25a1Q99MQ5 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC14.6□□□□□ -0.07
Col25a1Q99MQ5 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.6□□□□□ -0.07
Col25a1Q99MQ5 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col25a1Q99MQ5 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Col25a1Q99MQ5 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Col25a1Q99MQ5 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Col25a1Q99MQ5 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col25a1Q99MQ5 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.6□□□□□ -0.07
Col25a1Q99MQ5 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col25a1Q99MQ5 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col25a1Q99MQ5 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col25a1Q99MQ5 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.6□□□□□ -0.07
Col25a1Q99MQ5 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Col25a1Q99MQ5 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.6□□□□□ -0.07
Col25a1Q99MQ5 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col25a1Q99MQ5 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Col25a1Q99MQ5 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col25a1Q99MQ5 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col25a1Q99MQ5 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.6□□□□□ -0.07
Col25a1Q99MQ5 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col25a1Q99MQ5 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col25a1Q99MQ5 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col25a1Q99MQ5 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Col25a1Q99MQ5 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col25a1Q99MQ5 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col25a1Q99MQ5 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col25a1Q99MQ5 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col25a1Q99MQ5 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col25a1Q99MQ5 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col25a1Q99MQ5 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col25a1Q99MQ5 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.59□□□□□ -0.07
Col25a1Q99MQ5 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col25a1Q99MQ5 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Col25a1Q99MQ5 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.59□□□□□ -0.07
Col25a1Q99MQ5 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.59□□□□□ -0.07
Col25a1Q99MQ5 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.59□□□□□ -0.07
Col25a1Q99MQ5 Gm8959-201ENSMUST00000213150 571 ntBASIC14.59□□□□□ -0.07
Col25a1Q99MQ5 Gm18556-201ENSMUST00000219748 1031 ntBASIC14.59□□□□□ -0.07
Col25a1Q99MQ5 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.59□□□□□ -0.07
Col25a1Q99MQ5 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC14.59□□□□□ -0.07
Col25a1Q99MQ5 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col25a1Q99MQ5 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Col25a1Q99MQ5 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col25a1Q99MQ5 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col25a1Q99MQ5 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.59□□□□□ -0.07
Col25a1Q99MQ5 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col25a1Q99MQ5 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC14.59□□□□□ -0.07
Col25a1Q99MQ5 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col25a1Q99MQ5 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Col25a1Q99MQ5 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.59□□□□□ -0.07
Col25a1Q99MQ5 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.59□□□□□ -0.07
Col25a1Q99MQ5 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col25a1Q99MQ5 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col25a1Q99MQ5 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Col25a1Q99MQ5 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Col25a1Q99MQ5 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Col25a1Q99MQ5 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.58□□□□□ -0.07
Col25a1Q99MQ5 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Col25a1Q99MQ5 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Col25a1Q99MQ5 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.58□□□□□ -0.07
Col25a1Q99MQ5 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Col25a1Q99MQ5 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col25a1Q99MQ5 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col25a1Q99MQ5 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col25a1Q99MQ5 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col25a1Q99MQ5 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col25a1Q99MQ5 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col25a1Q99MQ5 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Col25a1Q99MQ5 Gm12241-201ENSMUST00000118330 726 ntBASIC14.58□□□□□ -0.08
Col25a1Q99MQ5 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col25a1Q99MQ5 Gm27438-201ENSMUST00000183480 110 ntBASIC14.58□□□□□ -0.08
Col25a1Q99MQ5 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col25a1Q99MQ5 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col25a1Q99MQ5 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col25a1Q99MQ5 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col25a1Q99MQ5 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col25a1Q99MQ5 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col25a1Q99MQ5 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col25a1Q99MQ5 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Col25a1Q99MQ5 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col25a1Q99MQ5 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col25a1Q99MQ5 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col25a1Q99MQ5 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col25a1Q99MQ5 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Col25a1Q99MQ5 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col25a1Q99MQ5 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms