Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lims1Q99JW4 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Lims1Q99JW4 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Lims1Q99JW4 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.88□□□□□ -0.35
Lims1Q99JW4 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lims1Q99JW4 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Lims1Q99JW4 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lims1Q99JW4 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lims1Q99JW4 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lims1Q99JW4 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lims1Q99JW4 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lims1Q99JW4 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lims1Q99JW4 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lims1Q99JW4 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lims1Q99JW4 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lims1Q99JW4 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lims1Q99JW4 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lims1Q99JW4 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Lims1Q99JW4 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.87□□□□□ -0.35
Lims1Q99JW4 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Lims1Q99JW4 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Lims1Q99JW4 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.87□□□□□ -0.35
Lims1Q99JW4 Mir8117-201ENSMUST00000184773 107 ntBASIC12.87□□□□□ -0.35
Lims1Q99JW4 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.87□□□□□ -0.35
Lims1Q99JW4 Gm18041-201ENSMUST00000218210 618 ntBASIC12.87□□□□□ -0.35
Lims1Q99JW4 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.87□□□□□ -0.35
Lims1Q99JW4 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.87□□□□□ -0.35
Lims1Q99JW4 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Lims1Q99JW4 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lims1Q99JW4 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lims1Q99JW4 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lims1Q99JW4 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Lims1Q99JW4 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lims1Q99JW4 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Lims1Q99JW4 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lims1Q99JW4 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lims1Q99JW4 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lims1Q99JW4 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lims1Q99JW4 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lims1Q99JW4 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lims1Q99JW4 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.87□□□□□ -0.35
Lims1Q99JW4 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Lims1Q99JW4 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.87□□□□□ -0.35
Lims1Q99JW4 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Lims1Q99JW4 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lims1Q99JW4 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Gm11779-201ENSMUST00000118541 368 ntBASIC12.86□□□□□ -0.35
Lims1Q99JW4 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lims1Q99JW4 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lims1Q99JW4 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Lims1Q99JW4 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lims1Q99JW4 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Lims1Q99JW4 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lims1Q99JW4 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lims1Q99JW4 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lims1Q99JW4 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lims1Q99JW4 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms