Protein–RNA interactions for Protein: Q99JB6

Foxp3, Forkhead box protein P3, mousemouse

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxp3Q99JB6 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Foxp3Q99JB6 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxp3Q99JB6 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxp3Q99JB6 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxp3Q99JB6 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Foxp3Q99JB6 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxp3Q99JB6 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxp3Q99JB6 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Foxp3Q99JB6 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Foxp3Q99JB6 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxp3Q99JB6 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Foxp3Q99JB6 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Foxp3Q99JB6 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Foxp3Q99JB6 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.34□□□□□ -0.11
Foxp3Q99JB6 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxp3Q99JB6 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxp3Q99JB6 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.34□□□□□ -0.11
Foxp3Q99JB6 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC14.34□□□□□ -0.11
Foxp3Q99JB6 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Foxp3Q99JB6 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxp3Q99JB6 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Foxp3Q99JB6 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.34□□□□□ -0.11
Foxp3Q99JB6 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Foxp3Q99JB6 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxp3Q99JB6 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.34□□□□□ -0.11
Foxp3Q99JB6 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Foxp3Q99JB6 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxp3Q99JB6 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxp3Q99JB6 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.34□□□□□ -0.11
Foxp3Q99JB6 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Foxp3Q99JB6 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Foxp3Q99JB6 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.33□□□□□ -0.11
Foxp3Q99JB6 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Foxp3Q99JB6 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxp3Q99JB6 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxp3Q99JB6 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.33□□□□□ -0.12
Foxp3Q99JB6 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxp3Q99JB6 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxp3Q99JB6 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxp3Q99JB6 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxp3Q99JB6 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.33□□□□□ -0.12
Foxp3Q99JB6 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxp3Q99JB6 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.33□□□□□ -0.12
Foxp3Q99JB6 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.33□□□□□ -0.12
Foxp3Q99JB6 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.33□□□□□ -0.12
Foxp3Q99JB6 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Foxp3Q99JB6 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.33□□□□□ -0.12
Foxp3Q99JB6 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxp3Q99JB6 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Foxp3Q99JB6 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxp3Q99JB6 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxp3Q99JB6 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.33□□□□□ -0.12
Foxp3Q99JB6 Gm10154-201ENSMUST00000084445 354 ntBASIC14.33□□□□□ -0.12
Foxp3Q99JB6 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
Foxp3Q99JB6 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxp3Q99JB6 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxp3Q99JB6 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Foxp3Q99JB6 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Foxp3Q99JB6 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Foxp3Q99JB6 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxp3Q99JB6 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Foxp3Q99JB6 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxp3Q99JB6 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxp3Q99JB6 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxp3Q99JB6 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Foxp3Q99JB6 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxp3Q99JB6 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxp3Q99JB6 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Foxp3Q99JB6 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Foxp3Q99JB6 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Foxp3Q99JB6 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxp3Q99JB6 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.32□□□□□ -0.12
Foxp3Q99JB6 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxp3Q99JB6 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Foxp3Q99JB6 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Foxp3Q99JB6 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Foxp3Q99JB6 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Foxp3Q99JB6 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.32□□□□□ -0.12
Foxp3Q99JB6 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC14.32□□□□□ -0.12
Foxp3Q99JB6 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.32□□□□□ -0.12
Foxp3Q99JB6 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Foxp3Q99JB6 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.32□□□□□ -0.12
Foxp3Q99JB6 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxp3Q99JB6 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Foxp3Q99JB6 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxp3Q99JB6 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.32□□□□□ -0.12
Foxp3Q99JB6 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxp3Q99JB6 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxp3Q99JB6 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
Foxp3Q99JB6 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxp3Q99JB6 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxp3Q99JB6 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.32□□□□□ -0.12
Foxp3Q99JB6 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Foxp3Q99JB6 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxp3Q99JB6 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Foxp3Q99JB6 Acot6-202ENSMUST00000222921 3622 ntBASIC14.32□□□□□ -0.12
Foxp3Q99JB6 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxp3Q99JB6 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxp3Q99JB6 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Foxp3Q99JB6 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms