Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd1Q99J36 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd1Q99J36 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.61□□□□□ -0.39
Thumpd1Q99J36 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.61□□□□□ -0.39
Thumpd1Q99J36 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd1Q99J36 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.61□□□□□ -0.39
Thumpd1Q99J36 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.61□□□□□ -0.39
Thumpd1Q99J36 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Thumpd1Q99J36 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.61□□□□□ -0.39
Thumpd1Q99J36 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd1Q99J36 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd1Q99J36 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd1Q99J36 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd1Q99J36 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd1Q99J36 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd1Q99J36 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd1Q99J36 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd1Q99J36 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd1Q99J36 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd1Q99J36 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.61□□□□□ -0.39
Thumpd1Q99J36 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd1Q99J36 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd1Q99J36 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd1Q99J36 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd1Q99J36 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd1Q99J36 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd1Q99J36 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd1Q99J36 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Thumpd1Q99J36 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd1Q99J36 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Thumpd1Q99J36 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.61□□□□□ -0.39
Thumpd1Q99J36 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Gm7153-201ENSMUST00000117092 455 ntBASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Gm7862-201ENSMUST00000121461 292 ntBASIC12.6□□□□□ -0.39
Thumpd1Q99J36 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Acot6-202ENSMUST00000222921 3622 ntBASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd1Q99J36 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thumpd1Q99J36 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thumpd1Q99J36 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.59□□□□□ -0.39
Thumpd1Q99J36 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thumpd1Q99J36 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Thumpd1Q99J36 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Thumpd1Q99J36 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Thumpd1Q99J36 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Thumpd1Q99J36 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thumpd1Q99J36 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thumpd1Q99J36 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Thumpd1Q99J36 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Thumpd1Q99J36 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Thumpd1Q99J36 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Thumpd1Q99J36 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Thumpd1Q99J36 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thumpd1Q99J36 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thumpd1Q99J36 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thumpd1Q99J36 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms