Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col20a1Q923P0 Gm12134-201ENSMUST00000122109 520 ntBASIC16.63■□□□□ 0.25
Col20a1Q923P0 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.63■□□□□ 0.25
Col20a1Q923P0 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC16.63■□□□□ 0.25
Col20a1Q923P0 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col20a1Q923P0 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Col20a1Q923P0 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col20a1Q923P0 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col20a1Q923P0 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col20a1Q923P0 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Col20a1Q923P0 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Col20a1Q923P0 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col20a1Q923P0 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col20a1Q923P0 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col20a1Q923P0 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col20a1Q923P0 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col20a1Q923P0 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col20a1Q923P0 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col20a1Q923P0 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col20a1Q923P0 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col20a1Q923P0 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col20a1Q923P0 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col20a1Q923P0 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Col20a1Q923P0 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col20a1Q923P0 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col20a1Q923P0 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Col20a1Q923P0 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col20a1Q923P0 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col20a1Q923P0 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col20a1Q923P0 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col20a1Q923P0 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Col20a1Q923P0 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col20a1Q923P0 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col20a1Q923P0 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col20a1Q923P0 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Col20a1Q923P0 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col20a1Q923P0 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col20a1Q923P0 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col20a1Q923P0 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col20a1Q923P0 Gm27701-201ENSMUST00000184498 110 ntBASIC16.62■□□□□ 0.25
Col20a1Q923P0 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col20a1Q923P0 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Col20a1Q923P0 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Col20a1Q923P0 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col20a1Q923P0 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col20a1Q923P0 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col20a1Q923P0 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col20a1Q923P0 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC16.61■□□□□ 0.25
Col20a1Q923P0 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col20a1Q923P0 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.61■□□□□ 0.25
Col20a1Q923P0 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.61■□□□□ 0.25
Col20a1Q923P0 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col20a1Q923P0 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.61■□□□□ 0.25
Col20a1Q923P0 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.61■□□□□ 0.25
Col20a1Q923P0 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Col20a1Q923P0 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col20a1Q923P0 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col20a1Q923P0 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Col20a1Q923P0 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.61■□□□□ 0.25
Col20a1Q923P0 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Col20a1Q923P0 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col20a1Q923P0 Gm38037-201ENSMUST00000192600 1624 ntBASIC16.61■□□□□ 0.25
Col20a1Q923P0 Gm9347-201ENSMUST00000211473 1607 ntBASIC16.61■□□□□ 0.25
Col20a1Q923P0 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col20a1Q923P0 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col20a1Q923P0 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col20a1Q923P0 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Col20a1Q923P0 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC16.61■□□□□ 0.25
Col20a1Q923P0 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Col20a1Q923P0 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col20a1Q923P0 Gm18307-201ENSMUST00000206864 949 ntBASIC16.61■□□□□ 0.25
Col20a1Q923P0 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col20a1Q923P0 CT030704.2-201ENSMUST00000228887 494 ntBASIC16.61■□□□□ 0.25
Col20a1Q923P0 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col20a1Q923P0 Mir497b-201ENSMUST00000093601 125 ntBASIC16.61■□□□□ 0.25
Col20a1Q923P0 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Col20a1Q923P0 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col20a1Q923P0 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col20a1Q923P0 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col20a1Q923P0 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col20a1Q923P0 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col20a1Q923P0 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Col20a1Q923P0 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col20a1Q923P0 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC16.6■□□□□ 0.25
Col20a1Q923P0 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC16.6■□□□□ 0.25
Col20a1Q923P0 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col20a1Q923P0 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col20a1Q923P0 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Col20a1Q923P0 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col20a1Q923P0 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col20a1Q923P0 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col20a1Q923P0 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col20a1Q923P0 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col20a1Q923P0 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col20a1Q923P0 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col20a1Q923P0 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col20a1Q923P0 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.6■□□□□ 0.25
Col20a1Q923P0 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col20a1Q923P0 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
Col20a1Q923P0 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms