Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb4Q91XZ6 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb4Q91XZ6 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb4Q91XZ6 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.07□□□□□ -0.16
Pcdhb4Q91XZ6 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Pcdhb4Q91XZ6 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb4Q91XZ6 Gm6973-201ENSMUST00000117080 721 ntBASIC14.07□□□□□ -0.16
Pcdhb4Q91XZ6 Gm14494-201ENSMUST00000118786 435 ntBASIC14.07□□□□□ -0.16
Pcdhb4Q91XZ6 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.07□□□□□ -0.16
Pcdhb4Q91XZ6 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb4Q91XZ6 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.07□□□□□ -0.16
Pcdhb4Q91XZ6 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb4Q91XZ6 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Pcdhb4Q91XZ6 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb4Q91XZ6 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Pcdhb4Q91XZ6 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb4Q91XZ6 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb4Q91XZ6 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb4Q91XZ6 Gm5422-201ENSMUST00000050717 2721 ntBASIC14.07□□□□□ -0.16
Pcdhb4Q91XZ6 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb4Q91XZ6 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Pcdhb4Q91XZ6 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb4Q91XZ6 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Pcdhb4Q91XZ6 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb4Q91XZ6 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb4Q91XZ6 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb4Q91XZ6 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb4Q91XZ6 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb4Q91XZ6 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb4Q91XZ6 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb4Q91XZ6 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb4Q91XZ6 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb4Q91XZ6 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.06□□□□□ -0.16
Pcdhb4Q91XZ6 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.06□□□□□ -0.16
Pcdhb4Q91XZ6 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb4Q91XZ6 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb4Q91XZ6 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Pcdhb4Q91XZ6 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb4Q91XZ6 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb4Q91XZ6 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb4Q91XZ6 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.06□□□□□ -0.16
Pcdhb4Q91XZ6 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb4Q91XZ6 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Pcdhb4Q91XZ6 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb4Q91XZ6 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb4Q91XZ6 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb4Q91XZ6 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb4Q91XZ6 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Pcdhb4Q91XZ6 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.06□□□□□ -0.16
Pcdhb4Q91XZ6 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb4Q91XZ6 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb4Q91XZ6 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Pcdhb4Q91XZ6 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Pcdhb4Q91XZ6 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Pcdhb4Q91XZ6 Grk6-205ENSMUST00000224653 2976 ntBASIC14.06□□□□□ -0.16
Pcdhb4Q91XZ6 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Pcdhb4Q91XZ6 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb4Q91XZ6 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb4Q91XZ6 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb4Q91XZ6 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb4Q91XZ6 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb4Q91XZ6 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb4Q91XZ6 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb4Q91XZ6 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb4Q91XZ6 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb4Q91XZ6 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb4Q91XZ6 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb4Q91XZ6 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb4Q91XZ6 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.05□□□□□ -0.16
Pcdhb4Q91XZ6 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.05□□□□□ -0.16
Pcdhb4Q91XZ6 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb4Q91XZ6 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb4Q91XZ6 Gm11543-201ENSMUST00000120758 370 ntBASIC14.05□□□□□ -0.16
Pcdhb4Q91XZ6 Gm27525-201ENSMUST00000184465 107 ntBASIC14.05□□□□□ -0.16
Pcdhb4Q91XZ6 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.05□□□□□ -0.16
Pcdhb4Q91XZ6 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb4Q91XZ6 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb4Q91XZ6 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb4Q91XZ6 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.05□□□□□ -0.16
Pcdhb4Q91XZ6 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb4Q91XZ6 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb4Q91XZ6 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb4Q91XZ6 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Pcdhb4Q91XZ6 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb4Q91XZ6 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Pcdhb4Q91XZ6 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.05□□□□□ -0.16
Pcdhb4Q91XZ6 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb4Q91XZ6 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb4Q91XZ6 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb4Q91XZ6 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Pcdhb4Q91XZ6 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Pcdhb4Q91XZ6 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb4Q91XZ6 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Pcdhb4Q91XZ6 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb4Q91XZ6 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb4Q91XZ6 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb4Q91XZ6 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb4Q91XZ6 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb4Q91XZ6 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb4Q91XZ6 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms