Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Mir1894-201ENSMUST00000122802 81 ntBASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Gm44799-201ENSMUST00000207639 1202 ntBASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Gm9396-201ENSMUST00000076703 567 ntBASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Gm9816-201ENSMUST00000122292 1414 ntBASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb5Q91XZ5 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb5Q91XZ5 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
Pcdhb5Q91XZ5 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb5Q91XZ5 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Pcdhb5Q91XZ5 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb5Q91XZ5 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Pcdhb5Q91XZ5 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC16.59■□□□□ 0.25
Pcdhb5Q91XZ5 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb5Q91XZ5 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb5Q91XZ5 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb5Q91XZ5 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb5Q91XZ5 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb5Q91XZ5 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb5Q91XZ5 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb5Q91XZ5 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb5Q91XZ5 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb5Q91XZ5 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb5Q91XZ5 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhb5Q91XZ5 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhb5Q91XZ5 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhb5Q91XZ5 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhb5Q91XZ5 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhb5Q91XZ5 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Pcdhb5Q91XZ5 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhb5Q91XZ5 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Pcdhb5Q91XZ5 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.58■□□□□ 0.24
Pcdhb5Q91XZ5 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb5Q91XZ5 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
Pcdhb5Q91XZ5 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb5Q91XZ5 Gm5303-201ENSMUST00000117943 1252 ntBASIC16.58■□□□□ 0.24
Pcdhb5Q91XZ5 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdhb5Q91XZ5 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdhb5Q91XZ5 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdhb5Q91XZ5 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC16.58■□□□□ 0.24
Pcdhb5Q91XZ5 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC16.58■□□□□ 0.24
Pcdhb5Q91XZ5 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb5Q91XZ5 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb5Q91XZ5 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb5Q91XZ5 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb5Q91XZ5 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdhb5Q91XZ5 Gm6159-201ENSMUST00000191249 1724 ntBASIC16.58■□□□□ 0.24
Pcdhb5Q91XZ5 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb5Q91XZ5 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb5Q91XZ5 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Pcdhb5Q91XZ5 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb5Q91XZ5 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.58■□□□□ 0.24
Pcdhb5Q91XZ5 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb5Q91XZ5 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb5Q91XZ5 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Pcdhb5Q91XZ5 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb5Q91XZ5 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb5Q91XZ5 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb5Q91XZ5 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb5Q91XZ5 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb5Q91XZ5 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb5Q91XZ5 AC115735.4-201ENSMUST00000227460 1944 ntBASIC16.57■□□□□ 0.24
Pcdhb5Q91XZ5 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb5Q91XZ5 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb5Q91XZ5 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC16.57■□□□□ 0.24
Pcdhb5Q91XZ5 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb5Q91XZ5 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Pcdhb5Q91XZ5 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb5Q91XZ5 Gm5912-201ENSMUST00000122282 1438 ntBASIC16.57■□□□□ 0.24
Pcdhb5Q91XZ5 AC114008.2-201ENSMUST00000227699 1347 ntBASIC16.57■□□□□ 0.24
Pcdhb5Q91XZ5 Gm15429-201ENSMUST00000151268 798 ntBASIC16.57■□□□□ 0.24
Pcdhb5Q91XZ5 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb5Q91XZ5 Gm7067-201ENSMUST00000207698 1249 ntBASIC16.57■□□□□ 0.24
Pcdhb5Q91XZ5 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb5Q91XZ5 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb5Q91XZ5 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms