Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Gm6415-201ENSMUST00000118488 348 ntBASIC13.96□□□□□ -0.17
Pcdhga4Q91XY4 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhga4Q91XY4 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhga4Q91XY4 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Pcdhga4Q91XY4 Olfr286-202ENSMUST00000205305 969 ntBASIC13.96□□□□□ -0.17
Pcdhga4Q91XY4 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.96□□□□□ -0.17
Pcdhga4Q91XY4 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
Pcdhga4Q91XY4 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhga4Q91XY4 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.96□□□□□ -0.17
Pcdhga4Q91XY4 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.96□□□□□ -0.18
Pcdhga4Q91XY4 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhga4Q91XY4 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhga4Q91XY4 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhga4Q91XY4 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhga4Q91XY4 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhga4Q91XY4 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.95□□□□□ -0.18
Pcdhga4Q91XY4 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhga4Q91XY4 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhga4Q91XY4 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhga4Q91XY4 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Pcdhga4Q91XY4 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
Pcdhga4Q91XY4 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhga4Q91XY4 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhga4Q91XY4 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhga4Q91XY4 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Pcdhga4Q91XY4 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhga4Q91XY4 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhga4Q91XY4 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Pcdhga4Q91XY4 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhga4Q91XY4 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Pcdhga4Q91XY4 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Pcdhga4Q91XY4 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhga4Q91XY4 Rubie-203ENSMUST00000227803 2430 ntBASIC13.95□□□□□ -0.18
Pcdhga4Q91XY4 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhga4Q91XY4 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhga4Q91XY4 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Pcdhga4Q91XY4 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.95□□□□□ -0.18
Pcdhga4Q91XY4 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.95□□□□□ -0.18
Pcdhga4Q91XY4 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Pcdhga4Q91XY4 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhga4Q91XY4 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhga4Q91XY4 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhga4Q91XY4 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhga4Q91XY4 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhga4Q91XY4 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhga4Q91XY4 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhga4Q91XY4 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.94□□□□□ -0.18
Pcdhga4Q91XY4 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.94□□□□□ -0.18
Pcdhga4Q91XY4 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhga4Q91XY4 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhga4Q91XY4 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Pcdhga4Q91XY4 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhga4Q91XY4 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhga4Q91XY4 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhga4Q91XY4 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhga4Q91XY4 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.94□□□□□ -0.18
Pcdhga4Q91XY4 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdhga4Q91XY4 Auts2-212ENSMUST00000178555 309 ntBASIC13.94□□□□□ -0.18
Pcdhga4Q91XY4 Mir7023-201ENSMUST00000185093 64 ntBASIC13.94□□□□□ -0.18
Pcdhga4Q91XY4 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdhga4Q91XY4 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhga4Q91XY4 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhga4Q91XY4 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhga4Q91XY4 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Pcdhga4Q91XY4 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhga4Q91XY4 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.94□□□□□ -0.18
Pcdhga4Q91XY4 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhga4Q91XY4 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhga4Q91XY4 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhga4Q91XY4 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhga4Q91XY4 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhga4Q91XY4 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Pcdhga4Q91XY4 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.93□□□□□ -0.18
Pcdhga4Q91XY4 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhga4Q91XY4 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhga4Q91XY4 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhga4Q91XY4 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhga4Q91XY4 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhga4Q91XY4 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Pcdhga4Q91XY4 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.93□□□□□ -0.18
Pcdhga4Q91XY4 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhga4Q91XY4 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.93□□□□□ -0.18
Pcdhga4Q91XY4 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhga4Q91XY4 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.93□□□□□ -0.18
Pcdhga4Q91XY4 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhga4Q91XY4 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhga4Q91XY4 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhga4Q91XY4 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhga4Q91XY4 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhga4Q91XY4 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhga4Q91XY4 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhga4Q91XY4 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Pcdhga4Q91XY4 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhga4Q91XY4 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhga4Q91XY4 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhga4Q91XY4 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhga4Q91XY4 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhga4Q91XY4 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhga4Q91XY4 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhga4Q91XY4 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms