Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh18Q8VHR0 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh18Q8VHR0 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh18Q8VHR0 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh18Q8VHR0 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.67□□□□□ -0.22
Pcdh18Q8VHR0 Gm18195-201ENSMUST00000207604 706 ntBASIC13.67□□□□□ -0.22
Pcdh18Q8VHR0 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh18Q8VHR0 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Pcdh18Q8VHR0 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.67□□□□□ -0.22
Pcdh18Q8VHR0 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Pcdh18Q8VHR0 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.67□□□□□ -0.22
Pcdh18Q8VHR0 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh18Q8VHR0 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh18Q8VHR0 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh18Q8VHR0 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh18Q8VHR0 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh18Q8VHR0 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh18Q8VHR0 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Pcdh18Q8VHR0 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh18Q8VHR0 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh18Q8VHR0 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh18Q8VHR0 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh18Q8VHR0 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Pcdh18Q8VHR0 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh18Q8VHR0 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh18Q8VHR0 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.67□□□□□ -0.22
Pcdh18Q8VHR0 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh18Q8VHR0 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh18Q8VHR0 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh18Q8VHR0 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh18Q8VHR0 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 Gm15590-201ENSMUST00000078419 552 ntBASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh18Q8VHR0 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh18Q8VHR0 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.65□□□□□ -0.22
Pcdh18Q8VHR0 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh18Q8VHR0 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.65□□□□□ -0.22
Pcdh18Q8VHR0 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh18Q8VHR0 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh18Q8VHR0 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh18Q8VHR0 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh18Q8VHR0 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Pcdh18Q8VHR0 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh18Q8VHR0 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.65□□□□□ -0.22
Pcdh18Q8VHR0 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh18Q8VHR0 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh18Q8VHR0 Gm25925-201ENSMUST00000158314 306 ntBASIC13.65□□□□□ -0.22
Pcdh18Q8VHR0 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh18Q8VHR0 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh18Q8VHR0 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.65□□□□□ -0.22
Pcdh18Q8VHR0 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.65□□□□□ -0.22
Pcdh18Q8VHR0 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh18Q8VHR0 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh18Q8VHR0 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Pcdh18Q8VHR0 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Pcdh18Q8VHR0 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh18Q8VHR0 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms