Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atf7Q8R0S1 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Atf7Q8R0S1 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atf7Q8R0S1 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atf7Q8R0S1 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atf7Q8R0S1 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Atf7Q8R0S1 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atf7Q8R0S1 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC16.69■□□□□ 0.26
Atf7Q8R0S1 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atf7Q8R0S1 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atf7Q8R0S1 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atf7Q8R0S1 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atf7Q8R0S1 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atf7Q8R0S1 Gm7336-201ENSMUST00000107041 1232 ntBASIC16.69■□□□□ 0.26
Atf7Q8R0S1 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Atf7Q8R0S1 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atf7Q8R0S1 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Atf7Q8R0S1 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Atf7Q8R0S1 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Atf7Q8R0S1 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atf7Q8R0S1 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atf7Q8R0S1 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atf7Q8R0S1 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.69■□□□□ 0.26
Atf7Q8R0S1 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Atf7Q8R0S1 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atf7Q8R0S1 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atf7Q8R0S1 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atf7Q8R0S1 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Atf7Q8R0S1 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Atf7Q8R0S1 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Atf7Q8R0S1 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atf7Q8R0S1 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atf7Q8R0S1 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Atf7Q8R0S1 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atf7Q8R0S1 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atf7Q8R0S1 Gm43399-201ENSMUST00000202546 2374 ntBASIC16.69■□□□□ 0.26
Atf7Q8R0S1 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atf7Q8R0S1 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atf7Q8R0S1 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atf7Q8R0S1 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.68■□□□□ 0.26
Atf7Q8R0S1 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Atf7Q8R0S1 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Atf7Q8R0S1 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Atf7Q8R0S1 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atf7Q8R0S1 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atf7Q8R0S1 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atf7Q8R0S1 Gm24543-201ENSMUST00000103867 82 ntBASIC16.68■□□□□ 0.26
Atf7Q8R0S1 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.68■□□□□ 0.26
Atf7Q8R0S1 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Atf7Q8R0S1 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC16.68■□□□□ 0.26
Atf7Q8R0S1 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atf7Q8R0S1 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC16.68■□□□□ 0.26
Atf7Q8R0S1 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Atf7Q8R0S1 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Atf7Q8R0S1 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Atf7Q8R0S1 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atf7Q8R0S1 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atf7Q8R0S1 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atf7Q8R0S1 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atf7Q8R0S1 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atf7Q8R0S1 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atf7Q8R0S1 Gm45667-201ENSMUST00000210380 1316 ntBASIC16.68■□□□□ 0.26
Atf7Q8R0S1 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.68■□□□□ 0.26
Atf7Q8R0S1 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC16.68■□□□□ 0.26
Atf7Q8R0S1 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atf7Q8R0S1 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atf7Q8R0S1 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC16.67■□□□□ 0.26
Atf7Q8R0S1 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Atf7Q8R0S1 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atf7Q8R0S1 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atf7Q8R0S1 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Atf7Q8R0S1 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atf7Q8R0S1 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atf7Q8R0S1 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC16.67■□□□□ 0.26
Atf7Q8R0S1 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atf7Q8R0S1 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Atf7Q8R0S1 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Atf7Q8R0S1 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Atf7Q8R0S1 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atf7Q8R0S1 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atf7Q8R0S1 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.67■□□□□ 0.26
Atf7Q8R0S1 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Atf7Q8R0S1 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.67■□□□□ 0.26
Atf7Q8R0S1 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Atf7Q8R0S1 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atf7Q8R0S1 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atf7Q8R0S1 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Atf7Q8R0S1 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atf7Q8R0S1 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atf7Q8R0S1 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atf7Q8R0S1 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Atf7Q8R0S1 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atf7Q8R0S1 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Atf7Q8R0S1 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf7Q8R0S1 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf7Q8R0S1 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf7Q8R0S1 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf7Q8R0S1 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf7Q8R0S1 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf7Q8R0S1 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms