Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
Cystm1Q8K353 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Cystm1Q8K353 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.99
Cystm1Q8K353 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
Cystm1Q8K353 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Cystm1Q8K353 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Cystm1Q8K353 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Cystm1Q8K353 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Gm4081-201ENSMUST00000195287 1838 ntBASIC8.89□□□□□ -0.99
Cystm1Q8K353 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cystm1Q8K353 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cystm1Q8K353 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Cystm1Q8K353 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC8.89□□□□□ -0.99
Cystm1Q8K353 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Gm6550-201ENSMUST00000187574 993 ntBASIC8.89□□□□□ -0.99
Cystm1Q8K353 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cystm1Q8K353 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Cystm1Q8K353 AC125108.1-201ENSMUST00000218986 2330 ntBASIC8.89□□□□□ -0.99
Cystm1Q8K353 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC8.89□□□□□ -0.99
Cystm1Q8K353 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cystm1Q8K353 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Cystm1Q8K353 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cystm1Q8K353 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cystm1Q8K353 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cystm1Q8K353 AC154527.4-201ENSMUST00000224364 1667 ntBASIC8.88□□□□□ -0.99
Cystm1Q8K353 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC8.88□□□□□ -0.99
Cystm1Q8K353 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Cystm1Q8K353 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cystm1Q8K353 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cystm1Q8K353 Gm7899-201ENSMUST00000192935 1897 ntBASIC8.88□□□□□ -0.99
Cystm1Q8K353 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cystm1Q8K353 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cystm1Q8K353 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cystm1Q8K353 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cystm1Q8K353 Gm11780-201ENSMUST00000136880 516 ntBASIC8.88□□□□□ -0.99
Cystm1Q8K353 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Cystm1Q8K353 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC8.88□□□□□ -0.99
Cystm1Q8K353 Gm37935-201ENSMUST00000192012 982 ntBASIC8.88□□□□□ -0.99
Cystm1Q8K353 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC8.88□□□□□ -0.99
Cystm1Q8K353 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC8.88□□□□□ -0.99
Cystm1Q8K353 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Cystm1Q8K353 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cystm1Q8K353 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cystm1Q8K353 Psmb5-202ENSMUST00000227257 622 ntBASIC8.88□□□□□ -0.99
Cystm1Q8K353 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cystm1Q8K353 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cystm1Q8K353 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cystm1Q8K353 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cystm1Q8K353 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC8.88□□□□□ -0.99
Cystm1Q8K353 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cystm1Q8K353 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cystm1Q8K353 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cystm1Q8K353 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cystm1Q8K353 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC8.88□□□□□ -0.99
Cystm1Q8K353 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cystm1Q8K353 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cystm1Q8K353 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cystm1Q8K353 Gm37500-201ENSMUST00000192059 1443 ntBASIC8.88□□□□□ -0.99
Cystm1Q8K353 Gm8242-201ENSMUST00000193029 1420 ntBASIC8.88□□□□□ -0.99
Cystm1Q8K353 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cystm1Q8K353 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms