Protein–RNA interactions for Protein: Q8K268

Abcf3, ATP-binding cassette sub-family F member 3, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf3Q8K268 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Abcf3Q8K268 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Abcf3Q8K268 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Abcf3Q8K268 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Abcf3Q8K268 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Abcf3Q8K268 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Abcf3Q8K268 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Abcf3Q8K268 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Abcf3Q8K268 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Abcf3Q8K268 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.19□□□□□ -0.14
Abcf3Q8K268 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.19□□□□□ -0.14
Abcf3Q8K268 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.19□□□□□ -0.14
Abcf3Q8K268 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Abcf3Q8K268 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Abcf3Q8K268 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Abcf3Q8K268 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Abcf3Q8K268 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Abcf3Q8K268 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Abcf3Q8K268 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Abcf3Q8K268 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Abcf3Q8K268 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Abcf3Q8K268 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Abcf3Q8K268 Gm8749-201ENSMUST00000117737 331 ntBASIC14.19□□□□□ -0.14
Abcf3Q8K268 Gm11764-201ENSMUST00000120221 623 ntBASIC14.19□□□□□ -0.14
Abcf3Q8K268 Gm11452-201ENSMUST00000122376 690 ntBASIC14.19□□□□□ -0.14
Abcf3Q8K268 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Abcf3Q8K268 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.19□□□□□ -0.14
Abcf3Q8K268 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Abcf3Q8K268 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Abcf3Q8K268 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Abcf3Q8K268 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Abcf3Q8K268 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Abcf3Q8K268 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.19□□□□□ -0.14
Abcf3Q8K268 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Abcf3Q8K268 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Abcf3Q8K268 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.19□□□□□ -0.14
Abcf3Q8K268 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Abcf3Q8K268 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Abcf3Q8K268 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Abcf3Q8K268 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Abcf3Q8K268 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Abcf3Q8K268 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Abcf3Q8K268 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Abcf3Q8K268 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Abcf3Q8K268 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Abcf3Q8K268 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Abcf3Q8K268 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Abcf3Q8K268 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.18□□□□□ -0.14
Abcf3Q8K268 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Abcf3Q8K268 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Abcf3Q8K268 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Abcf3Q8K268 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
Abcf3Q8K268 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Abcf3Q8K268 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Abcf3Q8K268 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Abcf3Q8K268 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Abcf3Q8K268 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Abcf3Q8K268 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Abcf3Q8K268 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Abcf3Q8K268 Gm10060-201ENSMUST00000212002 111 ntBASIC14.18□□□□□ -0.14
Abcf3Q8K268 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.18□□□□□ -0.14
Abcf3Q8K268 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.18□□□□□ -0.14
Abcf3Q8K268 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Abcf3Q8K268 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Abcf3Q8K268 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Abcf3Q8K268 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Abcf3Q8K268 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Abcf3Q8K268 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Abcf3Q8K268 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Abcf3Q8K268 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Abcf3Q8K268 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Abcf3Q8K268 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Abcf3Q8K268 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.18□□□□□ -0.14
Abcf3Q8K268 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Abcf3Q8K268 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Abcf3Q8K268 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Abcf3Q8K268 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Abcf3Q8K268 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Abcf3Q8K268 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Abcf3Q8K268 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Abcf3Q8K268 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Abcf3Q8K268 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Abcf3Q8K268 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Abcf3Q8K268 Gm14042-201ENSMUST00000120139 833 ntBASIC14.17□□□□□ -0.14
Abcf3Q8K268 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Abcf3Q8K268 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Abcf3Q8K268 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Abcf3Q8K268 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Abcf3Q8K268 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Abcf3Q8K268 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Abcf3Q8K268 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Abcf3Q8K268 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Abcf3Q8K268 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Abcf3Q8K268 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Abcf3Q8K268 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Abcf3Q8K268 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Abcf3Q8K268 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Abcf3Q8K268 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Abcf3Q8K268 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Abcf3Q8K268 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 136 ms