Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Syne4Q8CII8 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.91■□□□□ 0.14
Syne4Q8CII8 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Syne4Q8CII8 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Syne4Q8CII8 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.91■□□□□ 0.14
Syne4Q8CII8 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
Syne4Q8CII8 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Syne4Q8CII8 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Syne4Q8CII8 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.91■□□□□ 0.14
Syne4Q8CII8 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC15.91■□□□□ 0.14
Syne4Q8CII8 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Syne4Q8CII8 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Syne4Q8CII8 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC15.91■□□□□ 0.14
Syne4Q8CII8 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Syne4Q8CII8 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Syne4Q8CII8 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Syne4Q8CII8 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Syne4Q8CII8 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.9■□□□□ 0.14
Syne4Q8CII8 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Syne4Q8CII8 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Syne4Q8CII8 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Syne4Q8CII8 Gm11803-201ENSMUST00000119966 444 ntBASIC15.9■□□□□ 0.14
Syne4Q8CII8 Gm12329-201ENSMUST00000120829 1007 ntBASIC15.9■□□□□ 0.14
Syne4Q8CII8 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC15.9■□□□□ 0.14
Syne4Q8CII8 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Syne4Q8CII8 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC15.9■□□□□ 0.14
Syne4Q8CII8 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Syne4Q8CII8 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC15.9■□□□□ 0.14
Syne4Q8CII8 CT009713.10-202ENSMUST00000225734 696 ntBASIC15.9■□□□□ 0.14
Syne4Q8CII8 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Syne4Q8CII8 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Syne4Q8CII8 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Syne4Q8CII8 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Syne4Q8CII8 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Syne4Q8CII8 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Syne4Q8CII8 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
Syne4Q8CII8 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.14
Syne4Q8CII8 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.14
Syne4Q8CII8 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Syne4Q8CII8 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Syne4Q8CII8 AC161252.3-201ENSMUST00000225465 1549 ntBASIC15.89■□□□□ 0.13
Syne4Q8CII8 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Syne4Q8CII8 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.89■□□□□ 0.13
Syne4Q8CII8 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Syne4Q8CII8 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Syne4Q8CII8 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Syne4Q8CII8 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC15.89■□□□□ 0.13
Syne4Q8CII8 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Syne4Q8CII8 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC15.89■□□□□ 0.13
Syne4Q8CII8 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Syne4Q8CII8 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Syne4Q8CII8 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Syne4Q8CII8 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Syne4Q8CII8 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.89■□□□□ 0.13
Syne4Q8CII8 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Syne4Q8CII8 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Syne4Q8CII8 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Syne4Q8CII8 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Syne4Q8CII8 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Syne4Q8CII8 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Syne4Q8CII8 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Syne4Q8CII8 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Syne4Q8CII8 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Syne4Q8CII8 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Syne4Q8CII8 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Syne4Q8CII8 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Syne4Q8CII8 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Syne4Q8CII8 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC15.88■□□□□ 0.13
Syne4Q8CII8 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Syne4Q8CII8 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Syne4Q8CII8 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC15.88■□□□□ 0.13
Syne4Q8CII8 Gm18473-201ENSMUST00000220543 868 ntBASIC15.88■□□□□ 0.13
Syne4Q8CII8 AC154276.1-201ENSMUST00000228874 1299 ntBASIC15.88■□□□□ 0.13
Syne4Q8CII8 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Syne4Q8CII8 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.88■□□□□ 0.13
Syne4Q8CII8 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC15.88■□□□□ 0.13
Syne4Q8CII8 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Syne4Q8CII8 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Syne4Q8CII8 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Syne4Q8CII8 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
Syne4Q8CII8 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Syne4Q8CII8 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Syne4Q8CII8 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Syne4Q8CII8 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Syne4Q8CII8 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Syne4Q8CII8 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC15.87■□□□□ 0.13
Syne4Q8CII8 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Syne4Q8CII8 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Syne4Q8CII8 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC15.87■□□□□ 0.13
Syne4Q8CII8 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Syne4Q8CII8 Gm42550-201ENSMUST00000201553 960 ntBASIC15.87■□□□□ 0.13
Syne4Q8CII8 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Syne4Q8CII8 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Syne4Q8CII8 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Syne4Q8CII8 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Syne4Q8CII8 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Syne4Q8CII8 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Syne4Q8CII8 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Syne4Q8CII8 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.87■□□□□ 0.13
Syne4Q8CII8 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms