Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Gm7899-201ENSMUST00000192935 1897 ntBASIC15.43■□□□□ 0.06
Sox30Q8CGW4 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox30Q8CGW4 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sox30Q8CGW4 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox30Q8CGW4 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC15.43■□□□□ 0.06
Sox30Q8CGW4 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox30Q8CGW4 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox30Q8CGW4 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox30Q8CGW4 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox30Q8CGW4 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC15.43■□□□□ 0.06
Sox30Q8CGW4 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sox30Q8CGW4 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC15.43■□□□□ 0.06
Sox30Q8CGW4 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC15.43■□□□□ 0.06
Sox30Q8CGW4 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox30Q8CGW4 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox30Q8CGW4 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox30Q8CGW4 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sox30Q8CGW4 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox30Q8CGW4 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox30Q8CGW4 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox30Q8CGW4 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sox30Q8CGW4 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox30Q8CGW4 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.42■□□□□ 0.06
Sox30Q8CGW4 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox30Q8CGW4 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sox30Q8CGW4 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox30Q8CGW4 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox30Q8CGW4 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox30Q8CGW4 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Sox30Q8CGW4 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sox30Q8CGW4 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox30Q8CGW4 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox30Q8CGW4 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox30Q8CGW4 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sox30Q8CGW4 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox30Q8CGW4 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox30Q8CGW4 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sox30Q8CGW4 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox30Q8CGW4 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox30Q8CGW4 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox30Q8CGW4 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox30Q8CGW4 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox30Q8CGW4 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox30Q8CGW4 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox30Q8CGW4 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.41■□□□□ 0.06
Sox30Q8CGW4 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Sox30Q8CGW4 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox30Q8CGW4 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox30Q8CGW4 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox30Q8CGW4 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox30Q8CGW4 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox30Q8CGW4 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox30Q8CGW4 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox30Q8CGW4 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Sox30Q8CGW4 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Sox30Q8CGW4 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox30Q8CGW4 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.41■□□□□ 0.06
Sox30Q8CGW4 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox30Q8CGW4 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox30Q8CGW4 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox30Q8CGW4 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox30Q8CGW4 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC15.41■□□□□ 0.06
Sox30Q8CGW4 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.41■□□□□ 0.06
Sox30Q8CGW4 Gm18057-201ENSMUST00000208220 503 ntBASIC15.41■□□□□ 0.06
Sox30Q8CGW4 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox30Q8CGW4 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox30Q8CGW4 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox30Q8CGW4 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox30Q8CGW4 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Sox30Q8CGW4 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox30Q8CGW4 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
Sox30Q8CGW4 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox30Q8CGW4 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Sox30Q8CGW4 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox30Q8CGW4 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox30Q8CGW4 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox30Q8CGW4 Zkscan14-203ENSMUST00000198959 2243 ntBASIC15.4■□□□□ 0.06
Sox30Q8CGW4 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox30Q8CGW4 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox30Q8CGW4 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC15.4■□□□□ 0.06
Sox30Q8CGW4 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox30Q8CGW4 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Sox30Q8CGW4 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox30Q8CGW4 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox30Q8CGW4 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox30Q8CGW4 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.4■□□□□ 0.06
Sox30Q8CGW4 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox30Q8CGW4 Gm13823-201ENSMUST00000119930 345 ntBASIC15.4■□□□□ 0.06
Sox30Q8CGW4 Gm11025-201ENSMUST00000140773 466 ntBASIC15.4■□□□□ 0.06
Sox30Q8CGW4 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sox30Q8CGW4 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sox30Q8CGW4 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.4■□□□□ 0.06
Sox30Q8CGW4 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.4■□□□□ 0.06
Sox30Q8CGW4 Gm5069-202ENSMUST00000192714 1011 ntBASIC15.4■□□□□ 0.06
Sox30Q8CGW4 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox30Q8CGW4 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox30Q8CGW4 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Sox30Q8CGW4 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Sox30Q8CGW4 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox30Q8CGW4 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms