Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28bQ8CEG5 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.98□□□□□ -0.17
Ccdc28bQ8CEG5 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28bQ8CEG5 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28bQ8CEG5 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28bQ8CEG5 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.98□□□□□ -0.17
Ccdc28bQ8CEG5 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Ccdc28bQ8CEG5 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.98□□□□□ -0.17
Ccdc28bQ8CEG5 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28bQ8CEG5 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28bQ8CEG5 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28bQ8CEG5 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28bQ8CEG5 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28bQ8CEG5 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28bQ8CEG5 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28bQ8CEG5 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28bQ8CEG5 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28bQ8CEG5 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28bQ8CEG5 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28bQ8CEG5 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28bQ8CEG5 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28bQ8CEG5 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28bQ8CEG5 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28bQ8CEG5 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28bQ8CEG5 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28bQ8CEG5 Gm7230-201ENSMUST00000173026 815 ntBASIC13.98□□□□□ -0.17
Ccdc28bQ8CEG5 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.98□□□□□ -0.17
Ccdc28bQ8CEG5 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28bQ8CEG5 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28bQ8CEG5 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28bQ8CEG5 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28bQ8CEG5 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28bQ8CEG5 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28bQ8CEG5 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28bQ8CEG5 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28bQ8CEG5 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28bQ8CEG5 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Ccdc28bQ8CEG5 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28bQ8CEG5 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ccdc28bQ8CEG5 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc28bQ8CEG5 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.97□□□□□ -0.17
Ccdc28bQ8CEG5 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Ccdc28bQ8CEG5 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.97□□□□□ -0.17
Ccdc28bQ8CEG5 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc28bQ8CEG5 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc28bQ8CEG5 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc28bQ8CEG5 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc28bQ8CEG5 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc28bQ8CEG5 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc28bQ8CEG5 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.97□□□□□ -0.17
Ccdc28bQ8CEG5 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc28bQ8CEG5 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc28bQ8CEG5 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc28bQ8CEG5 Gm2272-201ENSMUST00000194903 582 ntBASIC13.97□□□□□ -0.17
Ccdc28bQ8CEG5 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.97□□□□□ -0.17
Ccdc28bQ8CEG5 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.97□□□□□ -0.17
Ccdc28bQ8CEG5 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc28bQ8CEG5 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc28bQ8CEG5 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ccdc28bQ8CEG5 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc28bQ8CEG5 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc28bQ8CEG5 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc28bQ8CEG5 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc28bQ8CEG5 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc28bQ8CEG5 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ccdc28bQ8CEG5 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Ccdc28bQ8CEG5 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc28bQ8CEG5 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.97□□□□□ -0.17
Ccdc28bQ8CEG5 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms