Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vcpip1Q8CDG3 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vcpip1Q8CDG3 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vcpip1Q8CDG3 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vcpip1Q8CDG3 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Vcpip1Q8CDG3 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vcpip1Q8CDG3 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vcpip1Q8CDG3 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vcpip1Q8CDG3 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vcpip1Q8CDG3 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vcpip1Q8CDG3 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vcpip1Q8CDG3 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vcpip1Q8CDG3 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.2■□□□□ 0.02
Vcpip1Q8CDG3 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vcpip1Q8CDG3 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vcpip1Q8CDG3 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vcpip1Q8CDG3 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vcpip1Q8CDG3 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vcpip1Q8CDG3 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vcpip1Q8CDG3 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vcpip1Q8CDG3 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vcpip1Q8CDG3 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vcpip1Q8CDG3 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vcpip1Q8CDG3 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vcpip1Q8CDG3 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vcpip1Q8CDG3 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vcpip1Q8CDG3 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.2■□□□□ 0.02
Vcpip1Q8CDG3 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vcpip1Q8CDG3 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vcpip1Q8CDG3 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vcpip1Q8CDG3 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.19■□□□□ 0.02
Vcpip1Q8CDG3 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vcpip1Q8CDG3 Il17rd-203ENSMUST00000225146 3366 ntBASIC15.19■□□□□ 0.02
Vcpip1Q8CDG3 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vcpip1Q8CDG3 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.19■□□□□ 0.02
Vcpip1Q8CDG3 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vcpip1Q8CDG3 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vcpip1Q8CDG3 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vcpip1Q8CDG3 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.19■□□□□ 0.02
Vcpip1Q8CDG3 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vcpip1Q8CDG3 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vcpip1Q8CDG3 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vcpip1Q8CDG3 Mir6956-201ENSMUST00000183598 62 ntBASIC15.19■□□□□ 0.02
Vcpip1Q8CDG3 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.19■□□□□ 0.02
Vcpip1Q8CDG3 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.19■□□□□ 0.02
Vcpip1Q8CDG3 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.19■□□□□ 0.02
Vcpip1Q8CDG3 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vcpip1Q8CDG3 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vcpip1Q8CDG3 Gm8396-201ENSMUST00000057361 823 ntBASIC15.19■□□□□ 0.02
Vcpip1Q8CDG3 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Vcpip1Q8CDG3 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vcpip1Q8CDG3 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vcpip1Q8CDG3 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vcpip1Q8CDG3 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vcpip1Q8CDG3 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vcpip1Q8CDG3 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vcpip1Q8CDG3 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Vcpip1Q8CDG3 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vcpip1Q8CDG3 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vcpip1Q8CDG3 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vcpip1Q8CDG3 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.18■□□□□ 0.02
Vcpip1Q8CDG3 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vcpip1Q8CDG3 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vcpip1Q8CDG3 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vcpip1Q8CDG3 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vcpip1Q8CDG3 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vcpip1Q8CDG3 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Vcpip1Q8CDG3 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vcpip1Q8CDG3 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vcpip1Q8CDG3 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.18■□□□□ 0.02
Vcpip1Q8CDG3 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vcpip1Q8CDG3 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vcpip1Q8CDG3 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.18■□□□□ 0.02
Vcpip1Q8CDG3 Gm18057-201ENSMUST00000208220 503 ntBASIC15.18■□□□□ 0.02
Vcpip1Q8CDG3 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vcpip1Q8CDG3 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vcpip1Q8CDG3 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vcpip1Q8CDG3 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vcpip1Q8CDG3 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vcpip1Q8CDG3 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Vcpip1Q8CDG3 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Vcpip1Q8CDG3 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vcpip1Q8CDG3 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC15.18■□□□□ 0.02
Vcpip1Q8CDG3 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Vcpip1Q8CDG3 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Vcpip1Q8CDG3 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Vcpip1Q8CDG3 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vcpip1Q8CDG3 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vcpip1Q8CDG3 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vcpip1Q8CDG3 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vcpip1Q8CDG3 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.17■□□□□ 0.02
Vcpip1Q8CDG3 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vcpip1Q8CDG3 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Vcpip1Q8CDG3 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vcpip1Q8CDG3 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vcpip1Q8CDG3 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.17■□□□□ 0.02
Vcpip1Q8CDG3 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.17■□□□□ 0.02
Vcpip1Q8CDG3 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vcpip1Q8CDG3 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Vcpip1Q8CDG3 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms