Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.68□□□□□ -0.38
Lysmd4Q8CC84 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd4Q8CC84 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd4Q8CC84 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Lysmd4Q8CC84 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Lysmd4Q8CC84 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd4Q8CC84 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd4Q8CC84 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Lysmd4Q8CC84 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd4Q8CC84 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Lysmd4Q8CC84 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd4Q8CC84 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.67□□□□□ -0.38
Lysmd4Q8CC84 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd4Q8CC84 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd4Q8CC84 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd4Q8CC84 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd4Q8CC84 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd4Q8CC84 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd4Q8CC84 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd4Q8CC84 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd4Q8CC84 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd4Q8CC84 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12.67□□□□□ -0.38
Lysmd4Q8CC84 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Lysmd4Q8CC84 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd4Q8CC84 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.67□□□□□ -0.38
Lysmd4Q8CC84 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd4Q8CC84 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd4Q8CC84 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd4Q8CC84 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd4Q8CC84 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd4Q8CC84 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd4Q8CC84 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd4Q8CC84 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd4Q8CC84 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.67□□□□□ -0.38
Lysmd4Q8CC84 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.67□□□□□ -0.38
Lysmd4Q8CC84 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd4Q8CC84 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Lysmd4Q8CC84 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Lysmd4Q8CC84 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Lysmd4Q8CC84 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd4Q8CC84 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd4Q8CC84 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd4Q8CC84 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd4Q8CC84 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd4Q8CC84 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd4Q8CC84 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd4Q8CC84 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.66□□□□□ -0.38
Lysmd4Q8CC84 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd4Q8CC84 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Lysmd4Q8CC84 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.66□□□□□ -0.38
Lysmd4Q8CC84 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.66□□□□□ -0.38
Lysmd4Q8CC84 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd4Q8CC84 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd4Q8CC84 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd4Q8CC84 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd4Q8CC84 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Lysmd4Q8CC84 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd4Q8CC84 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd4Q8CC84 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd4Q8CC84 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd4Q8CC84 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC12.66□□□□□ -0.38
Lysmd4Q8CC84 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.66□□□□□ -0.38
Lysmd4Q8CC84 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd4Q8CC84 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd4Q8CC84 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd4Q8CC84 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd4Q8CC84 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd4Q8CC84 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd4Q8CC84 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd4Q8CC84 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd4Q8CC84 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd4Q8CC84 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd4Q8CC84 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd4Q8CC84 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd4Q8CC84 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd4Q8CC84 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd4Q8CC84 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd4Q8CC84 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Lysmd4Q8CC84 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.66□□□□□ -0.38
Lysmd4Q8CC84 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Lysmd4Q8CC84 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lysmd4Q8CC84 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lysmd4Q8CC84 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lysmd4Q8CC84 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.65□□□□□ -0.38
Lysmd4Q8CC84 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.65□□□□□ -0.38
Lysmd4Q8CC84 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lysmd4Q8CC84 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lysmd4Q8CC84 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lysmd4Q8CC84 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lysmd4Q8CC84 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lysmd4Q8CC84 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lysmd4Q8CC84 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lysmd4Q8CC84 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Lysmd4Q8CC84 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.65□□□□□ -0.38
Lysmd4Q8CC84 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lysmd4Q8CC84 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Lysmd4Q8CC84 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.65□□□□□ -0.38
Lysmd4Q8CC84 Gm13884-201ENSMUST00000118103 829 ntBASIC12.65□□□□□ -0.38
Lysmd4Q8CC84 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.65□□□□□ -0.38
Lysmd4Q8CC84 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms