Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC16.52■□□□□ 0.23
Usp44Q8C2S0 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Usp44Q8C2S0 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
Usp44Q8C2S0 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC16.52■□□□□ 0.23
Usp44Q8C2S0 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Usp44Q8C2S0 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Usp44Q8C2S0 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Usp44Q8C2S0 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Usp44Q8C2S0 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Usp44Q8C2S0 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Usp44Q8C2S0 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Usp44Q8C2S0 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Usp44Q8C2S0 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Usp44Q8C2S0 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Usp44Q8C2S0 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Usp44Q8C2S0 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.51■□□□□ 0.23
Usp44Q8C2S0 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC16.51■□□□□ 0.23
Usp44Q8C2S0 Gm15393-201ENSMUST00000120499 219 ntBASIC16.51■□□□□ 0.23
Usp44Q8C2S0 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Usp44Q8C2S0 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Usp44Q8C2S0 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Usp44Q8C2S0 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Usp44Q8C2S0 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.51■□□□□ 0.23
Usp44Q8C2S0 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Usp44Q8C2S0 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Usp44Q8C2S0 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Usp44Q8C2S0 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Usp44Q8C2S0 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Usp44Q8C2S0 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Usp44Q8C2S0 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Usp44Q8C2S0 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Usp44Q8C2S0 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Usp44Q8C2S0 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Usp44Q8C2S0 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Usp44Q8C2S0 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Usp44Q8C2S0 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Usp44Q8C2S0 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Usp44Q8C2S0 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Usp44Q8C2S0 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Usp44Q8C2S0 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Usp44Q8C2S0 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Usp44Q8C2S0 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Usp44Q8C2S0 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.5■□□□□ 0.23
Usp44Q8C2S0 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Usp44Q8C2S0 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC16.5■□□□□ 0.23
Usp44Q8C2S0 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.5■□□□□ 0.23
Usp44Q8C2S0 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.5■□□□□ 0.23
Usp44Q8C2S0 Gm6283-201ENSMUST00000182369 1000 ntBASIC16.5■□□□□ 0.23
Usp44Q8C2S0 Gm2445-201ENSMUST00000182798 989 ntBASIC16.5■□□□□ 0.23
Usp44Q8C2S0 Gm29741-201ENSMUST00000192667 421 ntBASIC16.5■□□□□ 0.23
Usp44Q8C2S0 Ighv1-51-201ENSMUST00000192903 354 ntBASIC16.5■□□□□ 0.23
Usp44Q8C2S0 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC16.5■□□□□ 0.23
Usp44Q8C2S0 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.5■□□□□ 0.23
Usp44Q8C2S0 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Usp44Q8C2S0 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Usp44Q8C2S0 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Usp44Q8C2S0 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Usp44Q8C2S0 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Usp44Q8C2S0 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Usp44Q8C2S0 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Usp44Q8C2S0 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Usp44Q8C2S0 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Usp44Q8C2S0 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Usp44Q8C2S0 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Usp44Q8C2S0 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Usp44Q8C2S0 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Usp44Q8C2S0 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Usp44Q8C2S0 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Usp44Q8C2S0 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Usp44Q8C2S0 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Usp44Q8C2S0 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC16.49■□□□□ 0.23
Usp44Q8C2S0 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC16.49■□□□□ 0.23
Usp44Q8C2S0 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Usp44Q8C2S0 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC16.49■□□□□ 0.23
Usp44Q8C2S0 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Usp44Q8C2S0 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Usp44Q8C2S0 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Usp44Q8C2S0 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Usp44Q8C2S0 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Usp44Q8C2S0 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Usp44Q8C2S0 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Usp44Q8C2S0 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Usp44Q8C2S0 Gm4204-201ENSMUST00000110798 1231 ntBASIC16.49■□□□□ 0.23
Usp44Q8C2S0 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Usp44Q8C2S0 Gm12151-201ENSMUST00000121374 290 ntBASIC16.49■□□□□ 0.23
Usp44Q8C2S0 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC16.49■□□□□ 0.23
Usp44Q8C2S0 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Usp44Q8C2S0 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC16.49■□□□□ 0.23
Usp44Q8C2S0 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC16.49■□□□□ 0.23
Usp44Q8C2S0 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.49■□□□□ 0.23
Usp44Q8C2S0 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Usp44Q8C2S0 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Usp44Q8C2S0 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.49■□□□□ 0.23
Usp44Q8C2S0 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Usp44Q8C2S0 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Usp44Q8C2S0 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Usp44Q8C2S0 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Usp44Q8C2S0 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Usp44Q8C2S0 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Usp44Q8C2S0 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms