Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tsen54Q8C2A2 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tsen54Q8C2A2 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tsen54Q8C2A2 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC11.85□□□□□ -0.51
Tsen54Q8C2A2 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tsen54Q8C2A2 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tsen54Q8C2A2 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tsen54Q8C2A2 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC11.85□□□□□ -0.51
Tsen54Q8C2A2 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC11.85□□□□□ -0.51
Tsen54Q8C2A2 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tsen54Q8C2A2 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC11.85□□□□□ -0.51
Tsen54Q8C2A2 Gm2308-201ENSMUST00000166539 1004 ntBASIC11.85□□□□□ -0.51
Tsen54Q8C2A2 Mir5126-201ENSMUST00000175513 77 ntBASIC11.85□□□□□ -0.51
Tsen54Q8C2A2 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC11.85□□□□□ -0.51
Tsen54Q8C2A2 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC11.85□□□□□ -0.51
Tsen54Q8C2A2 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC11.85□□□□□ -0.51
Tsen54Q8C2A2 Gm44771-201ENSMUST00000206975 626 ntBASIC11.85□□□□□ -0.51
Tsen54Q8C2A2 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC11.85□□□□□ -0.51
Tsen54Q8C2A2 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tsen54Q8C2A2 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tsen54Q8C2A2 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tsen54Q8C2A2 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tsen54Q8C2A2 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tsen54Q8C2A2 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tsen54Q8C2A2 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Tsen54Q8C2A2 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tsen54Q8C2A2 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tsen54Q8C2A2 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tsen54Q8C2A2 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tsen54Q8C2A2 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tsen54Q8C2A2 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.85□□□□□ -0.51
Tsen54Q8C2A2 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tsen54Q8C2A2 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Tsen54Q8C2A2 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tsen54Q8C2A2 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tsen54Q8C2A2 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tsen54Q8C2A2 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tsen54Q8C2A2 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tsen54Q8C2A2 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tsen54Q8C2A2 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tsen54Q8C2A2 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC11.84□□□□□ -0.51
Tsen54Q8C2A2 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tsen54Q8C2A2 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tsen54Q8C2A2 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tsen54Q8C2A2 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tsen54Q8C2A2 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tsen54Q8C2A2 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tsen54Q8C2A2 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tsen54Q8C2A2 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tsen54Q8C2A2 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Tsen54Q8C2A2 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tsen54Q8C2A2 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tsen54Q8C2A2 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tsen54Q8C2A2 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC11.84□□□□□ -0.51
Tsen54Q8C2A2 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC11.84□□□□□ -0.51
Tsen54Q8C2A2 AC158538.2-201ENSMUST00000225455 906 ntBASIC11.84□□□□□ -0.51
Tsen54Q8C2A2 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tsen54Q8C2A2 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tsen54Q8C2A2 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tsen54Q8C2A2 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tsen54Q8C2A2 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tsen54Q8C2A2 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tsen54Q8C2A2 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Tsen54Q8C2A2 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tsen54Q8C2A2 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tsen54Q8C2A2 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tsen54Q8C2A2 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tsen54Q8C2A2 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tsen54Q8C2A2 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.84□□□□□ -0.51
Tsen54Q8C2A2 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tsen54Q8C2A2 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.84□□□□□ -0.51
Tsen54Q8C2A2 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tsen54Q8C2A2 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tsen54Q8C2A2 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.84□□□□□ -0.51
Tsen54Q8C2A2 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Tsen54Q8C2A2 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Tsen54Q8C2A2 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tsen54Q8C2A2 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Tsen54Q8C2A2 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Tsen54Q8C2A2 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tsen54Q8C2A2 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tsen54Q8C2A2 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Tsen54Q8C2A2 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tsen54Q8C2A2 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Tsen54Q8C2A2 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Tsen54Q8C2A2 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tsen54Q8C2A2 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tsen54Q8C2A2 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tsen54Q8C2A2 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Tsen54Q8C2A2 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Tsen54Q8C2A2 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tsen54Q8C2A2 Gm11764-201ENSMUST00000120221 623 ntBASIC11.83□□□□□ -0.52
Tsen54Q8C2A2 Gm12350-201ENSMUST00000121208 462 ntBASIC11.83□□□□□ -0.52
Tsen54Q8C2A2 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tsen54Q8C2A2 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tsen54Q8C2A2 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tsen54Q8C2A2 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Tsen54Q8C2A2 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC11.83□□□□□ -0.52
Tsen54Q8C2A2 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tsen54Q8C2A2 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms