Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trub1Q8C0D0 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.59□□□□□ -0.07
Trub1Q8C0D0 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trub1Q8C0D0 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trub1Q8C0D0 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trub1Q8C0D0 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.59□□□□□ -0.07
Trub1Q8C0D0 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.59□□□□□ -0.07
Trub1Q8C0D0 Gm28630-201ENSMUST00000187806 498 ntBASIC14.59□□□□□ -0.07
Trub1Q8C0D0 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.59□□□□□ -0.07
Trub1Q8C0D0 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.59□□□□□ -0.07
Trub1Q8C0D0 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.59□□□□□ -0.07
Trub1Q8C0D0 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.59□□□□□ -0.07
Trub1Q8C0D0 Gm16476-201ENSMUST00000221544 139 ntBASIC14.59□□□□□ -0.07
Trub1Q8C0D0 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.59□□□□□ -0.07
Trub1Q8C0D0 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trub1Q8C0D0 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Trub1Q8C0D0 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trub1Q8C0D0 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trub1Q8C0D0 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trub1Q8C0D0 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trub1Q8C0D0 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trub1Q8C0D0 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.59□□□□□ -0.07
Trub1Q8C0D0 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trub1Q8C0D0 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trub1Q8C0D0 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trub1Q8C0D0 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trub1Q8C0D0 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trub1Q8C0D0 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Trub1Q8C0D0 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trub1Q8C0D0 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.58□□□□□ -0.08
Trub1Q8C0D0 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trub1Q8C0D0 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trub1Q8C0D0 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trub1Q8C0D0 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trub1Q8C0D0 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trub1Q8C0D0 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.58□□□□□ -0.08
Trub1Q8C0D0 Gm12428-201ENSMUST00000119844 727 ntBASIC14.58□□□□□ -0.08
Trub1Q8C0D0 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trub1Q8C0D0 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.58□□□□□ -0.08
Trub1Q8C0D0 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trub1Q8C0D0 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trub1Q8C0D0 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trub1Q8C0D0 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trub1Q8C0D0 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trub1Q8C0D0 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trub1Q8C0D0 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trub1Q8C0D0 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trub1Q8C0D0 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.58□□□□□ -0.08
Trub1Q8C0D0 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trub1Q8C0D0 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trub1Q8C0D0 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.58□□□□□ -0.08
Trub1Q8C0D0 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trub1Q8C0D0 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trub1Q8C0D0 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trub1Q8C0D0 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trub1Q8C0D0 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trub1Q8C0D0 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trub1Q8C0D0 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trub1Q8C0D0 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trub1Q8C0D0 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trub1Q8C0D0 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trub1Q8C0D0 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trub1Q8C0D0 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trub1Q8C0D0 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trub1Q8C0D0 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trub1Q8C0D0 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trub1Q8C0D0 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trub1Q8C0D0 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trub1Q8C0D0 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trub1Q8C0D0 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.57□□□□□ -0.08
Trub1Q8C0D0 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trub1Q8C0D0 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trub1Q8C0D0 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trub1Q8C0D0 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trub1Q8C0D0 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.57□□□□□ -0.08
Trub1Q8C0D0 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.57□□□□□ -0.08
Trub1Q8C0D0 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trub1Q8C0D0 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trub1Q8C0D0 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.57□□□□□ -0.08
Trub1Q8C0D0 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trub1Q8C0D0 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.57□□□□□ -0.08
Trub1Q8C0D0 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Trub1Q8C0D0 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trub1Q8C0D0 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trub1Q8C0D0 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trub1Q8C0D0 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trub1Q8C0D0 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trub1Q8C0D0 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trub1Q8C0D0 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trub1Q8C0D0 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trub1Q8C0D0 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trub1Q8C0D0 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trub1Q8C0D0 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trub1Q8C0D0 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.56□□□□□ -0.08
Trub1Q8C0D0 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.56□□□□□ -0.08
Trub1Q8C0D0 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trub1Q8C0D0 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trub1Q8C0D0 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trub1Q8C0D0 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trub1Q8C0D0 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms